Scientific Name
Severe acute respiratory syndrome coronavirus 2
Common Names
-
Bioproject
PRJCA005689
Biosample
SAMC400109
Accession No.
GWHBDKE01000000
GWH reannotation accession
-
GSA raw reads
CRR343405
GVM variations of the species
16,114 (SNP), 820 (Indel)
Submitter Organization
GDCDC&GDIPH, Guangdong Provincial Center for Disease Control and Prevention
Contact
Baisheng Li, libsn@126.com
Sequence author(s)
Baisheng Li, Jing Lu
Released Date
2021-07-03
Assembly Level
Complete genome
Genome Representation
Full Genome
Assembly method
BWA 0.7.17-r1188
Sequencing & coverage
Illumina Miniseq 99
MGI 200 99
Download
DNA GFF RNA Protein
Publication(s)
Baisheng Li, et al. Viral infection and transmission in a large, well-traced outbreak caused by theSARS-CoV-2 Delta variant. Nature Communications. 2022, 13.
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHBDKE01000000 - SARS_CoV-2_human_CHN_5941_2021 Complete genome 2021-07-03 DNA GFF RNA Protein

Statistics of Genome Assembly

Genome size (bp) 29,789
GC content 37.98%
Annotation of Whole Genome Assembly
Protein Total
Total 12 12