Scientific Name
Severe acute respiratory syndrome coronavirus 2
Common Names
-
Bioproject
PRJCA005689
Biosample
SAMC400131
Accession No.
GWHBDKS01000000
GWH reannotation accession
-
GSA raw reads
CRR343535
GVM variations of the species
16,114 (SNP), 820 (Indel)
Submitter Organization
GDCDC&GDIPH, Guangdong Provincial Center for Disease Control and Prevention
Contact
Baisheng Li, libsn@126.com
Sequence author(s)
Baisheng Li, Jing Lu
Released Date
2021-07-03
Assembly Level
Draft genome in chromosome level
Genome Representation
Full Genome
Assembly method
BWA 0.7.17-r1188
Sequencing & coverage
Illumina Miniseq 99
MGI 200 99
Download
DNA GFF RNA Protein
Publication(s)
Baisheng Li, et al. Viral infection and transmission in a large, well-traced outbreak caused by theSARS-CoV-2 Delta variant. Nature Communications. 2022, 13.
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHBDKS01000000 - SARS_CoV-2_human_CHN_6545_2021 Draft genome in chromosome level 2021-07-03 DNA GFF RNA Protein

Statistics of Genome Assembly

Genome size (bp) 29,836
GC content 37.94%
Genome sequence No. 1
Maximum genome sequence length (bp) 29,836
Minimum genome sequence length (bp) 29,836
Average genome sequence length (bp) 29,836
Genome sequence N50 (bp) 29,836
Genome sequence N90 (bp) 29,836
Annotation of Whole Genome Assembly
Protein Total
Total 12 12