Scientific Name
Severe acute respiratory syndrome coronavirus 2
Common Names
-
Bioproject
PRJCA005769
Biosample
SAMC431670
Accession No.
GWHBDSE01000000
GWH reannotation accession
-
GSA raw reads
-
GVM variations of the species
16,114 (SNP), 820 (Indel)
Submitter Organization
GDCDC&GDIPH, Guangdong Provincial Center for Disease Control and Prevention
Contact
Baisheng Li, libsn@126.com
Sequence author(s)
Baisheng Li, Jing Lu
Released Date
2021-07-27
Assembly Level
Draft genome in chromosome level
Genome Representation
Full Genome
Assembly method
Artic pipeline v1.1.0
Sequencing & coverage
Nanopore 97.21767046784603
Download
DNA
Publication(s)
Mingxi Li, et al. Broadly neutralizing and protective nanobodies against SARS-CoV-2 Omicron subvariants BA.1, BA.2, and BA.4/5 and diverse sarbecoviruses. Nature communications. 2022, 13(1): 7957.
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHBDSE01000000 - SARS_CoV-2_human_CHN_20SF18530_2020 Draft genome in chromosome level 2021-07-27 DNA GFF RNA Protein

Statistics of Genome Assembly

Genome size (bp) 29,764
GC content 38.08%
Genome sequence No. 1
Maximum genome sequence length (bp) 29,764
Minimum genome sequence length (bp) 29,764
Average genome sequence length (bp) 29,764
Genome sequence N50 (bp) 29,764
Genome sequence N90 (bp) 29,764