- Scientific Name
- Oryza sativa
- Common Names
- red rice, rice; Asian cultivated rice;
- Bioproject
- PRJCA005910
- Biosample
- SAMC435933
- Accession No.
- GWHBEBN00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR305190
- GVM variations of the species
- 18,166,415 (SNP), 952,283 (Indel)
- Submitter Organization
- College of Plant Science Technology, Huazhong Agricultural University
- Contact
- Guotian Li, leeguotian@163.com
- Sequence author(s)
- Lei Yang
- Released Date
- 2021-07-29
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Partial Genome ( Nuclear )
- Assembly method
- NextDenovo 2.31
- Sequencing & coverage
- Nanopore 80.0
- Download
-
DNA
- Publication(s)
- Lei Yang, et al. The genome of the rice variety LTH provides insight into its universalsusceptibility mechanism to worldwide rice blast fungal strains. Computational and Structural Biotechnology Journal. 2022, 20: 1012-26.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBEBN00000000 | - | LTH | Draft genome in chromosome level | 2021-07-29 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 374,503,482 |
| GC content | 43.43% |
| Chromosomes sequence No. | 12 |