- Scientific Name
- Cucumis melo
- Common Names
- Oriental melon; muskmelon;
- Bioproject
- PRJCA018418
- Biosample
- SAMC2920780
- Accession No.
- GWHDOOK00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- 40,686,353 (SNP), 8,782,297 (Indel)
- Submitter Organization
- College of Horticulture and Forestry Sciences, Huazhong Agricultural University
- Contact
- minghua wei, 13127283781@163.com
- Sequence author(s)
- minghua wei
- Released Date
- 2023-11-24
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- de novo assembly 2023-12-31
- Sequencing & coverage
- PacBio 135.0
- Download
- DNA
- Reannotation Download
- -
- Publication(s)
- Minghua Wei, et al. Telomere-to-telomere genome assembly of melon (Cucumis melo L. var. inodorus)provides a high-quality reference for meta-QTL analysis of important traits. Horticulture Research. 2023, 10(10).
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHDOOK00000000 | - | Kuizilikjiz | Draft genome in chromosome level | 2023-11-24 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 379,158,321 |
| GC content | 34.69% |
| Chromosomes sequence No. | 1 |
| Genome sequence No. | 12 |
| Maximum genome sequence length (bp) | 37,740,220 |
| Minimum genome sequence length (bp) | 24,824,006 |
| Average genome sequence length (bp) | 31,596,527 |
| Genome sequence N50 (bp) | 32,630,960 |
| Genome sequence N90 (bp) | 25,785,498 |