ICG00006 Arachis hypogaea - Internal Control Genes Database (ICG)

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Arachis hypogaea

Accession: ICG00006

Latin Name: Arachis hypogaea

Common Name: Peanut

Taxonomy ID: 3818

Description: Arachis hypogaea L., an allotetraploid species, is one of the Wve most important oilseed crops cultivated worldwide. It is an important food and oil crop, is grown throughout the tropics and subtropics. Cultivated peanut is an allotetraploid (AABB genome). Its ancestral species are most likely the diploid Arachis duranensis and Arachis ipaensis, which contributed the A and B subgenomes, respectively Peanut seed contains 50% oil, of which 80% consists of oleic acids and linoleic acids.

ICG00006-1

Abiotic Stresses

Internal Control Genes

Gene Symbol	Gene Model	Application Scenario	Accession Number	Primers(5' - 3') (Forward/Reverse)	Size (bp)	Annealing Temperature	Detection
ADH3	Alcohol Dehydrogenase	Salinity Stress Drought Stress	EG529529	F: GCTTCAAGAGCAGGTCACAAGT R: GAGACATCCTCCTTCGTGCATA	143	60	SYBR
G6PD	Glyceraldehyde-3-Phosphate Dehydrogenase	Salinity Stress Drought Stress	EG030635	F: ACCATTCCAGAGGCTTATGAGC R: AAGGGAGTGACTTGAACTCTCC	151	60	SYBR
ELF1B	Elongation Factor	Salinity Stress Drought Stress	EE126175	F: AAGCTTCCCTGGCAAAGCTCAA R: TTCCTCAGCTGCCTTCTTATCC	153	60	SYBR

Molecular Types:

mRNA

Evaluation Methods

geNorm

NormFinder

Contact

Name: Pooja Bhatnagar-Mathur

Email: p.bhatnagar@cgiar.org

Institution: International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Patancheru, Andhra Pradesh, India

Reference

ICG00006-2

Developmental Stages

Abiotic Stresses

Internal Control Genes

Gene Symbol	Gene Model	Application Scenario	Accession Number	Primers(5' - 3') (Forward/Reverse)	Size (bp)	Annealing Temperature	Detection
UKN1	Hypothetical Protein	Leaf Stem Cotyledon Hypocotyl Root Salinity Stress	EG028875	F: AACGAAGACGACGACGAAGAAC R: GAACAATAGCAACAAGAAGCAAAGC	102	60	SYBR
TUA5	Tubulin	Leaf Stem Cotyledon Hypocotyl Root Salinity Stress	GO264294	F: CTGATGTCGCTGTGCTCTTGG R: CTGTTGAGGTTGGTGTAGGTAGG	94	60	SYBR
UKN2	Hypothetical Protein	Leaf Stem Cotyledon Hypocotyl Root Salinity Stress	GO334386	F: GGAAGATGGCGAGAAGCAACAG R: GCGAAGAGCGTAGAGTAGAAGTG	89	60	SYBR
ACT11	Actin	Leaf Stem Cotyledon Hypocotyl Root Salinity Stress	GO264911	F: TTGGAATGGGTCAGAAGGATGC R: GCTTCTTACTGAGGCACCACT	196	60	SYBR
EF1b	Elongation Factor	Low Temperature Condition	GO339841	F: GCTGCTGCTGCTGATGACG R: TGCCTTCTTATCCTCCTCTGTCTC	66	60	SYBR
HDC	Helicase	Salinity Stress Root	EE123564	F: GCCACCAGAGCCGCTATCG R: GCCACCAGAGCCGCTATCG	196	60	SYBR

Molecular Types:

mRNA

Evaluation Methods

geNorm

NormFinder

Contact

Name: Shanlin Yu

Email: yshanlin1956@163.com

Institution: Shandong Peanut Research Institute, Qingdao 266100, People's Republic of China.

Basic Information

Gene Summary

mRNA

Studies (2)

ICG00006-1

Internal Control Genes

Molecular Types:

Evaluation Methods

Contact

Reference

ICG00006-2

Internal Control Genes

Molecular Types:

Evaluation Methods

Contact

Reference

ICG00006-1	ADH3 G6PD ELF1B
ICG00006-2	UKN1 TUA5 UKN2 ACT11 EF1b HDC