ICG10187 Ciona savignyi - Internal Control Genes Database (ICG)

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Ciona savignyi

Accession: ICG10187

Latin Name: Ciona savignyi

Common Name: Pacific transparent sea squirt

Taxonomy ID: 51511

Description: As a marine invasive species widely distributed in north Asia, Pacific coast of North America and New Zealand, Ciona savignyi has become an excellent model system for studying invasion success. C. savignyi could rapidly respond to environmental changes such as those crucial for many marine organisms including temperature and salinity at the DNA methylation level.

ICG10187-1

Temperature Conditions

Abiotic Stresses

Internal Control Genes

Gene Symbol	Gene Model	Application Scenario	Accession Number	Primers(5' - 3') (Forward/Reverse)	Size (bp)	Annealing Temperature	Detection
RPS15	Ribosomal Protein S15	High Temperature Condition Low Temperature Condition Normal Temperature Condition	ENSCSAVG00000008262	F: GTGGAAGTCAAGCCGGAGAT R: AATCTTGACGAGTGAGTGGCG	110	-	SYBR
RPL17	Ribosomal Protein L17	High Temperature Condition Low Temperature Condition Normal Temperature Condition	ENSCSAVG00000010299	F: CGGAGTTGGTCGTTGTGCC R: CCTTGACATCGGCGTTGCT	123	-	SYBR
RhoA	Ras Homolog Family Member	High Temperature Condition Low Temperature Condition Normal Temperature Condition	ENSCSAVG00000006924	F: CCCAGAAGTCTACGTCCCAAC R: TCCTGTCCTGCTGTATCCCAC	102	-	SYBR
TMN	Membrane Protein	Salinity Stress	ENSCSAVG00000008637	F: GACAGATCCCAGAACAAGTGC R: TGGTGGGACCATATTGAGTTCAG	124	-	SYBR
MOB	Mob Kinase Activator	Salinity Stress	ENSCSAVG00000011530	F: CCTAAATGAGTGGATCGCTGTG R: TGGTATTCATACTTCGGTCCTGC	132	-	SYBR
UBQ2	Ubiquitin	Salinity Stress	ENSCSAVG00000009208	F: CAAGATTCCCGAGACCTATCC R: CAGCCCATTGGTCCTTGAGTAT	125	-	SYBR

Molecular Types:

mRNA

Evaluation Methods

geNorm

NormFinder

BestKeeper

Contact

Name: Aibin Zhan

Email: zhanaibin@hotmail.com

Institution: Key Laboratory of Environmental Biotechnology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, China

Basic Information

Gene Summary