ICG10207 Synechococcus elongatus - Internal Control Genes Database (ICG)

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Synechococcus elongatus

Accession: ICG10207

Latin Name: Synechococcus elongatus

Common Name: NA

Taxonomy ID: 1140

Description: Synechococcus elongatus PCC 7942 (S. elongatus PCC 7942) is a freshwater single cell photosynthetic autotrophic prokaryote. Its 2.74 Mb genome constitutes 2,715 genes and encodes approximately 2,612 proteins.

ICG10207-1

Abiotic Stresses

Internal Control Genes

Gene Symbol	Gene Model	Application Scenario	Accession Number	Primers(5' - 3') (Forward/Reverse)	Size (bp)	Annealing Temperature	Detection
PRS	Ribose-Phosphate Pyrophosphokinase	Double Reference Gene Calibration Method Universal Reference Gene	-	F: TCTTGCCCTACTACGGTTACGC R: TCGCTCCAGCCTGAGTGATTAG	102	58	SYBR
secA	Preprotein Translocase	Double Reference Gene Calibration Method Universal Reference Gene	-	F: ACGACGGTCAGATTGCCGAGAT R: GCGACATTCCCTGCTGGATTAG	204	59.1	SYBR
ppc	Phosphoenolpyruvate Carboxylase Kinase	No Treatment	-	F: CCCTTGCCAGGACCAGATGA R: CGTCGGGTGAGCGGTGAAAA	219	62	SYBR
rimM	Ribosomal Protein L21	Salinity Stress Hydrogen Peroxide Stress	-	F: TGATTGACCAAGCCAGCAGCAC R: GCCTCCACAAAGGGAATGTAGACC	121	62	SYBR
rnpA	Ribonuclease P Protein Component	Salinity Stress	-	F: CTCGTTGCCATCGACTGCG R: CGACTTTCGTTGACGGACTCTATTT	130	62	SYBR
ilvD	Dihydroxy-Acid Dehydratase	Hydrogen Peroxide Stress	-	F: CGGCGCTGCGGCTCAATAT R: ATCATCGGCGGCGACAACC	128	58	SYBR

Molecular Types:

mRNA

Evaluation Methods

geNorm

NormFinder

BestKeeper

Contact

Name: Yuwei Zhao

Email: zhaoyw@nwu.edu.cn

Institution: Provincial Key Laboratory of Biotechnology of Shaanxi Province, Northwest University, Xi’an 710000, China

Basic Information

Gene Summary