Input GS data files

GS genotypic data:

The GS markers accept hapmap format or matrix with sample in row and marker in column.

GS phenotypic data:

The GS phenotype inputs accept csv or text with sample in row and trait in column.

Other incidence matrices:

The fixed effects incidence matrices for model.

Data preprocessing

Table: The raw data of GS markers, default shows the first 100 lines and 100 columns.

Table: Statistic of genotype data.

Table: The genotype data after data processing and transformation, default shows the first 100 lines and 100 columns.

Table: The input data of phenotypes.

Table: The result data of PCA

Table: The result data of UAMP

Table: The result data of T-SNE

Visualization of input data

Modeling, evaluation and cross validation parameters (current)

Cross validation arguments:

Modeling arguments:

Evaluation arguments:

Table: The results of G2P

Table: The results of evaluation