ENST00000304233.3
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000304233.3 |
Source |
Gencode19 |
Same with |
lnc-BLK-1:1 |
Classification |
intergenic |
Length |
2150 nt |
Genomic location |
chr8+:11433822..11438851 |
Exon number |
3 |
Exons |
11433822..11434826,11435879..11436150,11437979..11438851 |
Genome context |
|
Sequence |
000001 AAGCACCTCA AACCCAGTTG GCCCCAGTGC CAGGAACCGA GCACTATTGT CATGTAGACC AAGCACCTCG AACCCAGCCG 000080
000081 GCCCCAGTGT TAGGAACCGG GTACTGTCGT CATCAGCATC AGGGTCAACC TCTGGACCCT GGCTTCCTCA GCATTAACAG 000160 000161 GAAAGGTTAG AAGCCCTGTT AGGTCTCTTC CAACTTTGTC TATAACTCTG AAAAAGCAAC GTGGAGTTTC TCTGGCACAC 000240 000241 TCTTTGAGGA AATAGAATTC GCCAAACCAA TGCAAATGGA GAAATATATT TCACCTGAGT AGGGAAGAAA AACCTTGTAA 000320 000321 AGGCTTCCAA GAACCTCCAG AAACCTACTG GATGAGCTTA CCACTAATCT CTTTTAAAGC AATTCCCTGA CAACACTCTG 000400 000401 TTAATCTCTC CTGAGCTCCT TAGTACCCCC TGAAAGTAGC AGGACAGCCT TACTTTCCAA ATCTTCACCT TTGCAAGAGT 000480 000481 CTAGTCTGTG AGTCCAGGCT CACCTGAAGT CTGAGATTTT GGGAGCTTTG GAGAATTCTG GATAAAATCC CTTACTGGAC 000560 000561 TTAGCAGGAA TCTCCGATCT GTGGAGAAGT CTCCTCAGAG ACTGAGCATC TGTTCCTAGC TCCCTCCGGG CTCTGATGCC 000640 000641 ATTAATGACT GCAGGAAGCT GTTCCAGGCC TCAATACAGA AAGAACCCTT AGACCCTCAG AGCTGGAGGT GTGCAGACTG 000720 000721 GTCTCTGCCT GGGCTCAACC TCTGTGATTT CTGGCAAGTT ACTGAAATTC TCTGTGCCTC AGGTTTCTTT TATGAAAATT 000800 000801 ATAACAGTTT TATCTCCTAG GGTTATGGTG AATACCTAGG GCAGGACCGG GCACTTAGAA AGCTCTCATC CAATGTCCCC 000880 000881 TAACTCTTGG AGACAATAAT CAAGACTTAG AGGAACTGAC TGGGGGAAAC GTCAACACTT TCTTGGTTCT CTCAGAGGCC 000960 000961 GGTGGAGACG CTGCTCCATT CTGCCTGGAT CATTTCCCAG GGCAGTATGA GACAGGCCTT CATCAGAAAG GCCGGGCCTG 001040 001041 TGGATGGAGG CAGGGGGCTG ATGGAAATGA CCTCTGTGCA GCTAAGGATG CTATGCTTTG TTTCTTGAGC TGAACTGCAA 001120 001121 TTGTGCCCAG CCTTCCTGGG ACAAGGGTGG GAACTCAGGA GTTACTACAA CCACCGCCAC CCCACCCTGG GAAGGCCATT 001200 001201 TGTGGTCTTG GACAAGTTCC CTCCCACGTG GCTGGACGAG CCCTCAGGCG ACAGCTGCGT TCTGTCGAGG AAGCCACGCG 001280 001281 TAGGTAGGTG ATTCCCCTAC TTAATCTGGA TCAGACTCAC CCTGGACTAA TGCCCATGCT CCTGCCTCCA GGCCCATAGA 001360 001361 AGGAGGAGGC AACCCATCTG GATGTGTGGA GGAGGTTTTG ATCTCCTCTT CTTGGTCAGA ACTGCTCATA AGAATCTCCA 001440 001441 CTGCAGGATC GATATTTGCT GCCATTTCTT TTCCTCTGCA CACACATTCT AGAGTAAGCA GCAAACAGAG GTGACCAGAG 001520 001521 ATGCTAGGAT GGCAACATGA GGGGTCTGGA AAGTCTCCCA CTGAGCGATC AGAAGCTGGG TTTCACATAC TCACCACGGC 001600 001601 TAGTCTAGCG AGTTTGCAGA ATTCAGAAAC GGGATGAGAC CCTGAGGTTT GCCTTTCATT AGCCTGGCTG TCCACTTATG 001680 001681 GGACAGTCTC TGCAGGAAGG AAGGAAACAG GGGAGGCTCC TACCTGCCCC ATCAGCTCAC TTTTTAAAAC ATGCTCACCT 001760 001761 GGCCTCACCA AGTGAGGTGG GAGGAGAGCC CGAGATCGGT TCACTTTGTG CTTCACATGT CCTTCACATG TCACCTCTCT 001840 001841 ACTCCGTGAA CTTGCAAGTC TCACCTGGGT CTCTCACTTT CCATTCCCTG TCTCTCAGAT CTACTAGCAC AAGGCTACAG 001920 001921 CCACAAAGCA CTTATATAGT TGGGCCCCTT TGCTGACACG TGACATGCAA TTCAGGGATG CCTCCTCCTC CCCCTAGAAG 002000 002001 TGATGAGTGC CTGCAGCTAT TGTAAATGTT AAAGTAAAAT TAATGTTGGT TGTACACCCA TGTTCATAGC AGCATGACTC 002080 002081 ACAATAGCCA AATGTAGAAG CAATCTGTAT TAGTCCGTTC TCAAGCTGCT AATAAAGACA TATCTGAGAC |
Predicted Small Protein
Name | ENST00000304233.3_smProtein_1520:1636 |
Length | 39 |
Molecular weight | 4016.3214 |
Aromaticity | 0.0526315789474 |
Instability index | 72.0578947368 |
Isoelectric point | 5.38604736328 |
Runs | 6 |
Runs residual | 0.014716066482 |
Runs probability | 0.0366984631691 |
Amino acid sequence | MLGWQHEGSGKSPTERSEAGFHILTTASLASLQNSETG |
Secondary structure | LLLLEELLLLLLLLLLLLLLEEEHHHHHHHHHHLLLLL |
PRMN | - |
PiMo | - |