ENST00000383019.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000383019.2 |
Source |
Gencode19 |
Same with |
lnc-SNURF-6:1,NONHSAT041160 |
Classification |
intergenic |
Length |
1967 nt |
Genomic location |
chr15+:26147507..26298267 |
Exon number |
5 |
Exons |
26147507..26147713,26260481..26261168,26294272..26294389,26297175..26297374,26297514..26298267 |
Genome context |
|
Sequence |
000001 GCTGATGCAT CGCAGTGTCC ACATATGCAG GGAGGCTGGT TTCCTAGGAA GCCTCCCAAT GAGGAAATTG TTGGGAATGT 000080
000081 GCTGCAAGGC GCTGCCTCGC TCTGGAGCCA GACGAGAGGC CGGAGCATCC GCCCCAACAT GGCTGGCTGT GTGAGCCTCA 000160 000161 GGAACGCTGG CAGCTCTGCA AGACTCTCTG CCATCTGCAA AATGTGGCCC AAAAACTACT TAAAAATTAA TCATATCAAA 000240 000241 ACAAGAGCAT CCATGAACCA ACTTCTGAGA ATTGCTGTTG CTGAGAAAGG CCTAGTGAGC CCCTGTTTCC TCAGGCCACC 000320 000321 TTCCTCTTCC TCCCATTGCC AAGGGCTCCT GTCGCCCCCG TCTGCGTTCT CCTGCCTGGC GCTCTGTCAC CTCCTGTGGA 000400 000401 GGCCCCACGT GTTCATCTGA GGGCTGCTGC TGCCCTTCCA GTATTATCCA CACCTGCCAT TATTACTGGG TCTTGCTCTC 000480 000481 TGACAAAGGG GCTACAGCGC TCCTTCCTGG TACACATGCA GCCCTCCTGC CCTTGCTCAA GGACCGCACC TCAACAGGGC 000560 000561 ACCTGCTCTC ATCTGGCCAT CGCCTCGGCA TAGGTAGCTC AAGATAGATG TTCAGCCCCA AGCCTCATGG CTGACTAACC 000640 000641 CTGTGGAACT TAAAAGTTCA AAGACAGGGA TGCCTGGATT CTGTCTCTGC CTCTGCACGT GTGTCTGTGC AGGCATCCGA 000720 000721 GCTGACCGGC CAGCTTCCCG CTGGTGGAGG TGGGAGGCAT AGGCTGCTTC TACACGCCCA AAGCCTACCC ACTACAGAGT 000800 000801 TACTTGCAGT CACACATGCT GACTAAGGGA GGAGAGCAAC TCCAATCAAA CGAAGCTAAG GAAGATAGCA CACAAACTGG 000880 000881 CAAGAAATTC CTGAGAGTCT CACCCTGTTA CCCAGACTGG AGTGAACTGG CACAATCTCG GCTCACTGTC ACCTCCACCT 000960 000961 CCCAGGTTCA AGACATTCTC CTGCCTCAGC CTCCTGAGTA GCTGGGATTA CAGAGGAGGA AAATGAGCTG CAGAAGGATC 001040 001041 AAATGACCTG CCTGAGGTGC CCTATCTGTT GGCACAGGCC AGAGCACATG GTGGATGCAG GGGCACCCCC TTCCCTTCTC 001120 001121 CTCCCCTCCG GCTCTTTGCT GACAGGATTC TCTCTTGCCT TCTCTGATGG TACCTGTGCT ACGTGCCACA TCCTTTCCCT 001200 001201 CAATGAATTT CAGGCAGTGG AAGGGGCCGC AGAAGTTCCT TGACTCATGA GGCGAGGCAT TCAGCGGCCT CGTGACACCT 001280 001281 CCCAGGATCT GCAGTCATTG GGCTGCACTT GCCAATAGCA ACACCTGGCA AAAATAGCTA AGAAGCAGAG CGGCCTGGGC 001360 001361 TCAGGAGCTG AGCAACCCCT GACTGGCCAG ATGGAGACTG TGTTGAGCTC TGCCCAAGCC CTGTGATCCT GGAAAACAGT 001440 001441 GAAGTTAAGG AGCCATCTGC ATTCTAGGGA ATGGCCCACT GCAAAAAATA GCCTTCCTTA TAGGACGTAG AGGACTCATG 001520 001521 ATGTCCCCTC ATTTATGATG AGCCAACACA CAGCCCTTCC AAATTCCGAT TCTTTGCTTC ATAACTGATG AGCTGTTTTG 001600 001601 TTCCCACTGG TCAATCGGAA CAACATTCTT GCTAACCAGA TTTTGGTTCA GCTCTTCTCC CTCCCCATGT ACCTGCCCTG 001680 001681 TGTCCTGTCC TCATCCTGAG CCAGCACACA CCCCTCCTTA GTAGCTCCTC CTGCAGCAGG CTGACCTCGG ACTCTCCCTG 001760 001761 ATCCATTGTC CAAATATATC ACCCTTTCAC CCTACATCCT CACACCCCAT TCTTTCTAGT TTTGTTCATT CCTCCCTGTG 001840 001841 AAAGATGAAC CCTCTTTGCC TAACCCCGGA CCTGCTTGCA GACTGCTATG ATGGCCAGAG TGTCCCCCCT ACTGCAAGAG 001920 001921 TCCCTTCTGT CCCTTGCAAC ATCTTTTAAA TAAAATCTCT CTTTACC |
Predicted Small Protein
Name | ENST00000383019.2_smProtein_815:1000 |
Length | 62 |
Molecular weight | 6793.5149 |
Aromaticity | 0.0491803278689 |
Instability index | 72.9836065574 |
Isoelectric point | 4.92486572266 |
Runs | 9 |
Runs residual | 0.00527605049934 |
Runs probability | 0.0479302832245 |
Amino acid sequence | MLTKGGEQLQSNEAKEDSTQTGKKFLRVSPCYPDWSELAQSRLTVTSTSQVQDILLPQPP E |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLEEEEELLLLLLHHHHHHLLEEEELLLLLEEEELLLLL L |
PRMN | - |
PiMo | - |