ENST00000398777.3
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
ENST00000398777.3 |
Source |
Gencode19 |
Same with |
lnc-LPHN3-1:2,NONHSAT096607 |
Classification |
intergenic |
Length |
546 nt |
Genomic location |
chr4+:62009375..62019680 |
Exon number |
2 |
Exons |
62009375..62009493,62019254..62019680 |
Genome context |
|
Sequence |
000001 TTATGTAATA TGCCTCAGGC AGTGGCAGAA ACCTAGGCTG AAATAACCAG CACTACTTGC CAAACACTTT AGAAAGATTA 000080
000081 TGTTTCTTCT CCATTACAGA AGTGGAACAT ATGGTTCAGA TTCTCCTCAT TAAACTACCT GCCCTCTGTA ATGTAGCTCT 000160 000161 TCTGTGCTGC AGAAATTGAT ACTACACAAG AAAAGAAATG ATGGGAGAAT AGTGAAGAAG AGAAGAACTG GCCAGGTAGC 000240 000241 AACATATAAG AGGCCAAGGG CCGGGCGCAG TGGCTCACAC CTGTAATCCA AACACTTTGG GAGGCCAAGG CGGGCAGATC 000320 000321 ACCTGAGGTT GGGAGTTTGA GACCAGCCTG ACCAACATGG GGAAACCCCA TCTCTACCAA AAATACAAAA TTAGCCAGGC 000400 000401 GTGGTGGTGC ATGCCTGTAA TCCCAGCTAC TCAGGAGGTT GAGGCAGGAG AATCACTTGA ACCCAGGAGG CAGAGACTGC 000480 000481 AGTGAGCCGA GATTGCGCCA TTGCACTCCA GCCTGGGTAA CAAGAGTGAA ACTCCGTCTC AAAAAA |
Predicted Small Protein
Name | ENST00000398777.3_smProtein_356:484 |
Length | 43 |
Molecular weight | 4984.7373 |
Aromaticity | 0.0952380952381 |
Instability index | 69.5761904762 |
Isoelectric point | 9.03363037109 |
Runs | 8 |
Runs residual | 0.0143158529234 |
Runs probability | 0.0347995053878 |
Amino acid sequence | MGKPHLYQKYKISQAWWCMPVIPATQEVEAGESLEPRRQRLQ |
Secondary structure | LLLLLHHHHLLHHHHEEELLLLLLLLLLLLLLLLLHHHHHLL |
PRMN | - |
PiMo | - |