ENST00000399003.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000399003.1

Source

Gencode19

Same with

lnc-MPEG1-1:1,NONHSAT021520

Classification

intergenic

Length

2805 nt

Genomic location

chr11-:59036349..59051506

Exon number

2

Exons

59036349..59039081,59051435..59051506

Genome context

Sequence
000001 ACTGGACATC TGCAGAGAGG ACAAGAAATG GGGCACCCAC ACAATCAAAA CCCCAGGGGA AAAGGCTTGA AGGTTCAGCC 000080
000081 AAAAATCCAG CCCCTCTCAA AGGACAAAGA TCAACCTTCC AGAACAATTA GCAAACACTT CTCAGAGTCC TCCATGCTGT 000160
000161 GCAGATGGTA AGCATCTCTG GGAGTCTCGC CAGCACTGTG AGTAAGGCAG CCTTTTTACC CATTTCACAG AAGGAGAAAC 000240
000241 TAAGGCTTAG TAAGGTCAAG TAACTAATTC TGCCTCCCAC ACTTCACTCC CTAGAGTTTT ATGTGTGCAT CTGTTAAAGT 000320
000321 TCTCCTTTTA TCGCCAGCAG TGTTTATGTA TAATTAAAAT AGCTCACATC TGTTGATTAA CAGTCACATT ACAACCTGCA 000400
000401 TTAACTCTTC CACTTAATGC CTGTTAAAGG ATTAGCAAAC CATTTTACAG ATGAGGAAGG CAGGGCACAG AGAATTAATG 000480
000481 TCCACACCAT GCTTATCAGT GAGTGGAGCA GGGATTCAAA CCTAGACCTT CTGGGTCTAG AGCCCTCCTC AGCCATCACC 000560
000561 TCTCATTCTC CATTAGAGTT GGTTATCATG TGAGTTGAGG CCCAAAGGTT AATGGAAGTT ATTATTCTTC TTCACCACCA 000640
000641 ATTGAACTTT TTATCTTTAC CTACTGTCCT CTTCATCCTT TTAATGCTTT GTACCCTAAA ATCCGCTTAG ATATTAACTT 000720
000721 TGCCAGTTCT TTCTTTTTGG TTACATGTGC CAGGTATACT TTGTCAAACT TTTAATTTTG GGTGTTTTGC TTTGTTTTTT 000800
000801 GTTGGTGAGA CAAGATCTCA CTCTGTCGCC CAGGCTGGAG TGCAGTGGTG CAATCTGGGC TCACTGCAAC CCCCGCCTCC 000880
000881 TGGGCATAAG CAATCTTCCT GCCTTGGCCT CCCAAGTAGC TGAGACCACA GGCACGAGCC ACCACACCCA GCTAACTACT 000960
000961 TGTAATTTTT TTGATAGAGA CAGGTCTTGC CATGTCACTC AGACTGATCT CAAAACTCCT GGGCTCAGGC GACCCACCCA 001040
001041 CCTTGGCCTC CCAAAGTGCT GGGATTATAG GTGTGAGCCA CTGCACCTGA CCCAATTTGT AATTTTGAAC CTCTTCTTAC 001120
001121 TATCCTGTTT CAGTTTTTTT TTTGTAAACA ACTATAGCTG GATTTTGTTT TCTAACCCAG TCTAAAGCAG TCTCAGATTT 001200
001201 TGTTAGAACA ACTGAAGGAT CTGACATTTG TATGTCACTT TATTCTATGT GAATGGTTTA TTTTACTCCT TTTTCCATAG 001280
001281 TTTTGATGGT TTGGGCAAAT TACTATTTAT TCTCTTTCTA ATTGTCAATC TATCATTACA GCAAATGGTT GCTTCCTGAT 001360
001361 CATTATATAG AAACAGGGTA AGCACCTGCC TCCCGCTAGG ACTCTCTCTG CTTCCTTCCG CCCTACCCAC CCCAGTAAGA 001440
001441 GCTACCCAAG AAGGCTCCTA TCCCTGCCAC CTTCCACTGA TATTTTCCTA TAAACTGTGA GACTCAACTA ACAAGGATTC 001520
001521 CCTCTCCTTC CAACTTGGGG TCCCTATTCT GATCAACTGC CATTTCATTA GGGCCTTTCT TGATGATTTC CTTCATACGT 001600
001601 AACACAAGCG GGAATATCCT CTGAATTTCG CTTGCTCGTC TGCAAAATAT ATTTCTTAGT CTGGTCAGGG AATGGTATTA 001680
001681 ATGCTCTGGT GAGGCTTCCT GGGCCCAGGC CAGCCAGAGT CCTCCGGTTT TCAGTGCTGC AAATGAGGAA TCTGCTGCCA 001760
001761 ATGTGTTTCT TTTCTTCCTC CTTTGTCAAT TATCTATTTA TTCTGCTGGG AAGCCTCTTT GATTTTATCT GTAGCTTTCA 001840
001841 AGAATGTCAC CAGGAGATGC CAAGGGTGTA TCTTTTTCTT CAATGTAACC CTGCCTGGAA CTCTAACAAC CTTTTCAATG 001920
001921 TGCAAACTCA TGCCCTCTTC TGATCAGGGA AAATTTCTAC TATTATTTAT TGATCATATT TGCCATGTCC AGACCTGCTT 002000
002001 CCTCTTCTCC TTCCACAGCC CCTAACATTC ACAGGTAGAT GAAAAGACAT CCACCAAACC TATATTTTCT TTCGTGACTT 002080
002081 CCACCTGTGT TTCTGGTTTT CTGGGAGGCC TTTGTTTCCC AGAAACAGGA AAACCATCCT CTTTTCCACT TGATGTTTTG 002160
002161 AATTTTCTAA ATTTGAAAAT CCTAGTTCTA GAACCTGTTT TCTTGGGCAG TATCTGGATT TCCCTGGGTT TTTGAAACCT 002240
002241 AACACTTGTC CAGTATGTGC CGCTTGGCTT TCCTTTTCCC TCCAGCTGGG GGTCCCTCAA GGCTACTCCA TGTCCCCAGC 002320
002321 AGCCAGGTCC AGCTGTGGGG TCCCCTTCCA GTGGGTGCAC GGTTATGCCT CTGGCCCCTG ACCTGCCCTG GGGCAGCAAT 002400
002401 AGCTTTCAGC AACCTCTGGG ACAGAGGGCA AGGGAAGAAT AGAGCAGAAA GACTCTAACC TCATCTAAGC CCACTCAGGA 002480
002481 CTCCAAGGAC AGGAATCGAT TCACACTTTC TCTTCTGACT TGTTTTTGTA GAGATAAGGT TTTGTCACGT TGCCCAGGCT 002560
002561 GGGTCTTGAA CTCCCAGACT CAAGTGATCC TCCAGCCTTG GCCTCCCAAA GTGCTAGGAT TACAGGTGTG AGCCACTGCA 002640
002641 CCCAGCCAGG TGCCTTTGTA AGAGACCTTA GCCCCCTTGC CTCTTCTGCC ATGTGAGGAC ACAGGGAATC AGAAAGTGGG 002720
002721 TCCCTTACCA GACACAAAAT CTGCTGGCAC CTTGATCTTG GACTTTGTCT CCAGAATTGT GAGAATAAAT TTCTGTTTAT 002800
002801 AAGCC
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Predicted Small Protein

Name ENST00000399003.1_smProtein_1742:1942
Length 67
Molecular weight 7849.0742
Aromaticity 0.19696969697
Instability index 51.7878787879
Isoelectric point 5.96771240234
Runs 10
Runs residual 0.000907276356379
Runs probability 0.0317700052994
Amino acid sequence MRNLLPMCFFSSSFVNYLFILLGSLFDFICSFQECHQEMPRVYLFLQCNPAWNSNNLFNV
QTHALF
Secondary structure LLLLLLHHHHLHHHHHHHHHHHHHHHHHHHHHHHHHHHLLHHHEEEEELLLLLLLLHHHH
HHHHLL
PRMN LLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
LLLLLL
PiMo iiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooooooooooooooooooooooooo
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