ENST00000400755.3

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000400755.3

Source

Gencode19

Same with

NONHSAT005631

Classification

intergenic

Length

601 nt

Genomic location

chr1+:142618771..142679074

Exon number

5

Exons

142618771..142618856,142621001..142621059,142624070..142624129,142670568..142670607,142678719..142679074

Genome context

Sequence
000001 ACTCCGCCAT TTTCATCCGG AAGTGCGTCA CCCAGAGGCG GTCTTGTAGC GGGGCCGGCT TGGGGCTTGG TTCTATGTCC 000080
000081 CTGCGGCTAT GTTTCCAGTG TCCTCTGGGT GTTTCCAAGA GCAACAGGAA ACGAATAAAT CTCTGTTGAA GAGATACCAT 000160
000161 TTGACATTTT AGAGATGCCT GCATGCAAAC TCGTAAAACA TCTGAGTGAA CACTTTTATC CAACTTTTCT CAAGTCAGAG 000240
000241 TACAGGAGCA CAGGCTTTTC GACGTAGGCC GGACAACTCT TCAGCTTTGC TGCTTAGAAG TTCATTCCAC CAGATACACC 000320
000321 CTAAATCATC ACCCTAAAGT TCAGTTTCAC AGATCTCCAG GGAATGGTCA CTGTGTAGCC AATTACTTTG CTAAGGCAAA 000400
000401 AGAAAAAACC CTTGGCTCCT TTTCCCAGTA AGTTTCTCAT TTTCATCTGA GACCTTACAA GCCTGGCCTT CAGTGTCCAT 000480
000481 CCTTCTGTCA GCCTTTTAAT CATAACTATT TAACAAGTCT CTGCAATGGT CCAAACTTTC CCTCATCTTG TTATCTTCTT 000560
000561 CCAAGCTCTC CAAACTCTCT AACCTCTGGC CATTACCCAA T
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Predicted Small Protein

Name ENST00000400755.3_smProtein_74:148
Length 25
Molecular weight 2767.3673
Aromaticity 0.0416666666667
Instability index 54.3833333333
Isoelectric point 10.1416625977
Runs 5
Runs residual 0.0267857142857
Runs probability 0.0481363716657
Amino acid sequence MSLRLCFQCPLGVSKSNRKRINLC
Secondary structure LLEEEEEELLLLLLLLLHHHHLLL
PRMN -
PiMo -