ENST00000400755.3
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000400755.3 |
Source |
Gencode19 |
Same with |
NONHSAT005631 |
Classification |
intergenic |
Length |
601 nt |
Genomic location |
chr1+:142618771..142679074 |
Exon number |
5 |
Exons |
142618771..142618856,142621001..142621059,142624070..142624129,142670568..142670607,142678719..142679074 |
Genome context |
|
Sequence |
000001 ACTCCGCCAT TTTCATCCGG AAGTGCGTCA CCCAGAGGCG GTCTTGTAGC GGGGCCGGCT TGGGGCTTGG TTCTATGTCC 000080
000081 CTGCGGCTAT GTTTCCAGTG TCCTCTGGGT GTTTCCAAGA GCAACAGGAA ACGAATAAAT CTCTGTTGAA GAGATACCAT 000160 000161 TTGACATTTT AGAGATGCCT GCATGCAAAC TCGTAAAACA TCTGAGTGAA CACTTTTATC CAACTTTTCT CAAGTCAGAG 000240 000241 TACAGGAGCA CAGGCTTTTC GACGTAGGCC GGACAACTCT TCAGCTTTGC TGCTTAGAAG TTCATTCCAC CAGATACACC 000320 000321 CTAAATCATC ACCCTAAAGT TCAGTTTCAC AGATCTCCAG GGAATGGTCA CTGTGTAGCC AATTACTTTG CTAAGGCAAA 000400 000401 AGAAAAAACC CTTGGCTCCT TTTCCCAGTA AGTTTCTCAT TTTCATCTGA GACCTTACAA GCCTGGCCTT CAGTGTCCAT 000480 000481 CCTTCTGTCA GCCTTTTAAT CATAACTATT TAACAAGTCT CTGCAATGGT CCAAACTTTC CCTCATCTTG TTATCTTCTT 000560 000561 CCAAGCTCTC CAAACTCTCT AACCTCTGGC CATTACCCAA T |
Predicted Small Protein
Name | ENST00000400755.3_smProtein_74:148 |
Length | 25 |
Molecular weight | 2767.3673 |
Aromaticity | 0.0416666666667 |
Instability index | 54.3833333333 |
Isoelectric point | 10.1416625977 |
Runs | 5 |
Runs residual | 0.0267857142857 |
Runs probability | 0.0481363716657 |
Amino acid sequence | MSLRLCFQCPLGVSKSNRKRINLC |
Secondary structure | LLEEEEEELLLLLLLLLHHHHLLL |
PRMN | - |
PiMo | - |