ENST00000409898.2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000409898.2

Source

Gencode19

Same with

lnc-PLGLB2-1:4,NONHSAT072147

Classification

intergenic

Length

560 nt

Genomic location

chr2+:87754995..87906258

Exon number

4

Exons

87754995..87755164,87882777..87882865,87899588..87899741,87906112..87906258

Genome context

Sequence
000001 CTTCTTAGTC GTGTGTACAT CATTGGGAAT GGAGGGAAAT AAATGACTGG ATGGTCGCTG CTTTTTAAGT TTCAAATTGA 000080
000081 CATTCCAGAC AAGCGGTGCC TGAGCCCGTG CCTGTCTTCA GATCTTCACA GCACAGTTCC TGGGAAGGTG GAGCCACCAG 000160
000161 CCTCTCCTTG ACAAGCAAAG TGGATCAGCA AAGGCTGCAG TCACCAGCAT CTTTTCCAAC CTTAATGAAC TGTATCCTCA 000240
000241 AAAGAACACT ATCAGACTGA TGAGGAAACT GAATCCCAGA ATGGTGGAGT GATTTGACGA ATATTGCAAA ACTATAATGG 000320
000321 GGAGATGAGA TGGGGATCCA AGTCTTGTGC CCCCAAAGAC AGGGCACCAG GCAGCGTAGA GGTGGCCAGT ACCAGAGCAA 000400
000401 CAGCCTAACA ATGGCTCTGC CGACTTCCAG TTCTGGAACA AGATGGTTAA ACTCATTTTT CCCTGCTCTG CTCCTCTAAA 000480
000481 TACAACTAAG TACCTTGGAA ACTATTCAGC AGACAATGAT AAAGGGCTCT GAAAGCTAGA AGAAAAGGTG TACTTGCAAG 000560
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Predicted Small Protein

Name ENST00000409898.2_smProtein_329:478
Length 50
Molecular weight 5455.2189
Aromaticity 0.0816326530612
Instability index 75.0653061224
Isoelectric point 11.8297729492
Runs 9
Runs residual 0.0216216216216
Runs probability 0.0399222752163
Amino acid sequence MGIQVLCPQRQGTRQRRGGQYQSNSLTMALPTSSSGTRWLNSFFPALLL
Secondary structure LLEEEELLLLLLLLLLLLLEEEELLEEEELLLLLLLLHHHHHHHHHLLL
PRMN -
PiMo -