ENST00000411804.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000411804.1

Source

Gencode19

Same with

lnc-LCE5A-1:1,NONHSAT006486

Classification

overlapping(AS)

Length

707 nt

Genomic location

chr1+:152346430..152417932

Exon number

2

Exons

152346430..152346523,152417320..152417932

Genome context

Sequence
000001 ATCAGTCTAC GCAAATGTGT TTGGGTGCAA TGTACCTGGC AATTTCATGG GGCAGTCGGG AGGACAGTGT GGCTGAAGCA 000080
000081 CAGTGAGTGA GAGGAAAACA GCAATGAAGT GAATGCAACT GATGCCTCCT CAAAAGTTTG CTACCTGCCA AGACTTTCAA 000160
000161 GCATGAAAAT ATCTTTATTT TTCCCTTTTA AAATTGATGG GTAGGCCATA TGGGAGAGAG GGAAATACTG ACAAAGAGGG 000240
000241 CACCTCAAGA AAAGCATGCC TATAAAAATA ATGTGACAAA CAATGAAACA ACACACAAAC AGTTTGACAG ATAAGAGAGC 000320
000321 AAAGGATCAC CACACGCCCG TGATTCTAGA GCAAGTGGTG ACTTTAGTGT GTGGCTGTGC TCATGCATAT GGACCTTACA 000400
000401 CAACTGCAAT CAGCATCTGC ATACCTACAC CCAGTAACCT GCTTTCTCTA CCTAATATGA TATAATGAGC ATTTTTCTAT 000480
000481 ATTGCTACAT AGTCTTTATA ATTACTTTAA ATGACTGTAT AATATTCCAT TCATTATATC ACTGCTGAAT ATTTAGGTTG 000560
000561 CTTGTAGTTT TTCCTTTGCT CATTTTTATG AATTAACAAA TGTAAAGTAT TTCACCCACT ACCTTCAAAT TATATATACT 000640
000641 TGGTCGGCAC TTTATTTCCT TCCCGTTCTG CCCCTTTATA TAAATAAAGA AAAGTATGAA AGATTCA
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Predicted Small Protein

Name ENST00000411804.1_smProtein_209:313
Length 35
Molecular weight 4085.4795
Aromaticity 0.0588235294118
Instability index 51.5941176471
Isoelectric point 9.39654541016
Runs 5
Runs residual 0.0390915860015
Runs probability 0.0246599540717
Amino acid sequence MGEREILTKRAPQEKHAYKNNVTNNETTHKQFDR
Secondary structure LLLEEELLLLLLHHHHHHLLLLLLLLLLLLLLLL
PRMN -
PiMo -