ENST00000411804.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000411804.1 |
Source |
Gencode19 |
Same with |
lnc-LCE5A-1:1,NONHSAT006486 |
Classification |
overlapping(AS) |
Length |
707 nt |
Genomic location |
chr1+:152346430..152417932 |
Exon number |
2 |
Exons |
152346430..152346523,152417320..152417932 |
Genome context |
|
Sequence |
000001 ATCAGTCTAC GCAAATGTGT TTGGGTGCAA TGTACCTGGC AATTTCATGG GGCAGTCGGG AGGACAGTGT GGCTGAAGCA 000080
000081 CAGTGAGTGA GAGGAAAACA GCAATGAAGT GAATGCAACT GATGCCTCCT CAAAAGTTTG CTACCTGCCA AGACTTTCAA 000160 000161 GCATGAAAAT ATCTTTATTT TTCCCTTTTA AAATTGATGG GTAGGCCATA TGGGAGAGAG GGAAATACTG ACAAAGAGGG 000240 000241 CACCTCAAGA AAAGCATGCC TATAAAAATA ATGTGACAAA CAATGAAACA ACACACAAAC AGTTTGACAG ATAAGAGAGC 000320 000321 AAAGGATCAC CACACGCCCG TGATTCTAGA GCAAGTGGTG ACTTTAGTGT GTGGCTGTGC TCATGCATAT GGACCTTACA 000400 000401 CAACTGCAAT CAGCATCTGC ATACCTACAC CCAGTAACCT GCTTTCTCTA CCTAATATGA TATAATGAGC ATTTTTCTAT 000480 000481 ATTGCTACAT AGTCTTTATA ATTACTTTAA ATGACTGTAT AATATTCCAT TCATTATATC ACTGCTGAAT ATTTAGGTTG 000560 000561 CTTGTAGTTT TTCCTTTGCT CATTTTTATG AATTAACAAA TGTAAAGTAT TTCACCCACT ACCTTCAAAT TATATATACT 000640 000641 TGGTCGGCAC TTTATTTCCT TCCCGTTCTG CCCCTTTATA TAAATAAAGA AAAGTATGAA AGATTCA |
Predicted Small Protein
Name | ENST00000411804.1_smProtein_209:313 |
Length | 35 |
Molecular weight | 4085.4795 |
Aromaticity | 0.0588235294118 |
Instability index | 51.5941176471 |
Isoelectric point | 9.39654541016 |
Runs | 5 |
Runs residual | 0.0390915860015 |
Runs probability | 0.0246599540717 |
Amino acid sequence | MGEREILTKRAPQEKHAYKNNVTNNETTHKQFDR |
Secondary structure | LLLEEELLLLLLHHHHHHLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |