ENST00000412084.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000412084.1 |
Source |
Gencode19 |
Same with |
lnc-CLEC2A-1:1,NONHSAT026854 |
Classification |
intergenic |
Length |
979 nt |
Genomic location |
chr12-:10089178..10096094 |
Exon number |
5 |
Exons |
10089178..10089413,10091662..10091769,10092508..10092692,10095088..10095171,10095729..10096094 |
Genome context |
|
Sequence |
000001 GTGCATGCCC GGCTGCCGTT GCTGCCCCTG CCTCGTACAA ACGTCAGAGA AGGCACATGA CACGCCCCTG GGGGCCATCT 000080
000081 GGCCCAAGTC CACCTGCGCG GCTGAGTGGA GGATGCTAGG TTGCTGTGCT GTTTCTCCTA CTGTCTTGCT GCCGCACCAC 000160 000161 CCCTCAGAAA AACCGGGTCG TCAGTTTCCT GCGGTTTGCA CTCACCAAAT ATACTTAGCA ATTTGCAATT CACCCGCAGG 000240 000241 ATTATTCCAG CCTCTGTGAT CACACACAGA AGGATGAGCC TTCCTCGTGA GGGTTGGAGA TGGAGGGAGA AGGGATGGAG 000320 000321 AGTAAGGATG GGACGGAGGT TGTGGAGCAG CAGACCAACA CGCCAGAAAG GAAAATAATG ATCATCTCAA TTTTTATATG 000400 000401 TGGAGGCATT GCTTTTCTTC TTTGGGGGAT TTTAAGATTT CCCAGAAAAT TTGGAATTCC AAGGCACCTT AGAAACAAGA 000480 000481 CATGCCTAGA AAATTTGACT ATGTGTCCAC AAGGCTGGAA CTGAATCAAT AATAATTGCT TCTTTCAATC TGAACATGAA 000560 000561 ACAACGTGGA TCAATGGCTG AGAAAACTGC AGAAGTTATG GATCTCTGGC CAGGCTCAAC TCTCAGAATG AAATGGGAAT 000640 000641 CTTTGATGCA TTATCTGGGG CCGTCTTTAT ATTGGTTTGA ACTGAGCAAG CACAATGCAA ACAAAACGTG GATGTGGGCA 000720 000721 GATGGAGCTA CATTCAGCAA TTGTGAAAGA ATCGAGTTTT GTGCTATGAG TCATGGGAGC AAAACGTGAG TATTTAGAAG 000800 000801 TGGAGAGGAC CACGAAGAAG GAAGCCCTGG TGACTTGAAG AAATCATGGA GAGTTCTCCG GATTCCCACA AACCTATGGG 000880 000881 GTTTAGATTC CAGCTAATAC TTACACGGGT CTCAGAAGGA CAGAGGGCAA GGGTTAACAT CTGGCTGATA TTAAAGTCTC 000960 000961 TGCACCTCTT AATATTTTA |
Predicted Small Protein
Name | ENST00000412084.1_smProtein_299:523 |
Length | 75 |
Molecular weight | 8481.875 |
Aromaticity | 0.0810810810811 |
Instability index | 42.7540540541 |
Isoelectric point | 7.73529052734 |
Runs | 9 |
Runs residual | 0.0210283454186 |
Runs probability | 0.0495102946083 |
Amino acid sequence | MEGEGMESKDGTEVVEQQTNTPERKIMIISIFICGGIAFLLWGILRFPRKFGIPRHLRNK TCLENLTMCPQGWN |
Secondary structure | LLLLLLLLLLLLEEEELLLLLLLLEEEEEEEEELHHHHHHHHHHHHLLLLLLLLLLLLLL LHHHLLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLL LLLLLLLLLLLLLL |
PiMo | ooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiii iiiiiiiiiiiiii |