ENST00000413244.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000413244.1

Source

Gencode19

Same with

lnc-CRYBA4-9:3,NONHSAT084590

Classification

intergenic

Length

571 nt

Genomic location

chr22+:27727748..27775226

Exon number

4

Exons

27727748..27727899,27731119..27731291,27732058..27732223,27775147..27775226

Genome context

Sequence
000001 AGCTTCCTGG GGTGCGTAGC TGAAGGTAGC AGGGAGCAAA AAGAATCTGA AGGGGAAGTG AACAATGTAG AGCGTATCTG 000080
000081 TGCTGAAGAC GTAAGGAGAG AGTGGAGGTC AGAAGCTGGC ATGGTCCCTG GTGCATGTAT CAGCCGCTAA AGAAGTGGAG 000160
000161 AGTATGAACA TAAGCAAGAG GAAGTGATGA GTATCCCTTC CAGGAGAACT CTAAGAGGCA GTGAGTGATT TGCTGGGCTC 000240
000241 CCAAGCCCTC TGCTCTGATG ACAGCAAAGC CCCAAATCAT GGTGCCTCCA TCAGTCGGGA CCCCTCAGCA GAGCCAGCTT 000320
000321 CACAGCTGGA GTGGATGAAT CAGAACTTTC CCCATGGGAG CATTTATAAA AAGGGGACAC CCAGCGCAGA AGATGTTTTC 000400
000401 CAGGGAGATC TCGGGGAGCC CAACAAGCCA AGAAGAGCAG AGCAAAGCAT TCCAAGGAAG GACTCTAAGT CTGCAACCGA 000480
000481 GCACACACGA GGATGGGAAT AGGGACATCT GCTGCATTTG GCTGTTGGAG AAACACAAGG AAATCATGGA CAAGTGCCAG 000560
000561 GTGTGGTGAC A
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Predicted Small Protein

Name ENST00000413244.1_smProtein_353:568
Length 72
Molecular weight 8163.2297
Aromaticity 0.0704225352113
Instability index 64.2943661972
Isoelectric point 7.76336669922
Runs 12
Runs residual 0.0204595997035
Runs probability 0.046230053583
Amino acid sequence MGAFIKRGHPAQKMFSREISGSPTSQEEQSKAFQGRTLSLQPSTHEDGNRDICCIWLLEK
HKEIMDKCQVW
Secondary structure LLEEEELLLLLLLLEEEELLLLLLLHHHHHHHHLLLEEELLLLLLLLLLLLEEEEEHHHH
HHHHHHHHLLL
PRMN -
PiMo -