ENST00000414515.3
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000414515.3 |
Source |
Gencode19 |
Same with |
, |
Classification |
antisense |
Length |
2097 nt |
Genomic location |
chr9-:72700732..72728776 |
Exon number |
3 |
Exons |
72700732..72702546,72703235..72703410,72728671..72728776 |
Genome context |
|
Sequence |
000001 GCCAGCTGCC AGAAGCTTCT CACTCCGTGG AGACCTTGGA GTCGAGGATG AAATGTCTTA CAACTGTGGG GAGACCTTGG 000080
000081 CTTTTCCAAA GCCTACCAGG GTCCAGGACT TGGAAGCTAA GGCCCAGAGA GGAGGAGAAA CTTGATCAAA GTCAATCAGA 000160 000161 CAATGCAGAA TCGAGAAAAG TACCTGGACC TCTATGCCCA TGCTTCTAGC AGCCAGCCTC CTAAAATACC TCTAGTTGAA 000240 000241 GCCAAAGTTA GAATCCTTCT ACGAAACTAC AGGATTAAAA TGGAATGGTT ACATGACCCA GGCTTGACCA ATCAGATCAT 000320 000321 CCAAACCCTT TGCCACAGTG ATTGGTCCAG GGATACATGC ATGAGCCAGC TCAGGTAAAT GAGACTCAAT TATAAGAATT 000400 000401 TTGTTAGCGC AATTGGGAAA AAGAAGTTTT CTTTCCATGA GAACTATCAG CTATAAGAAT GTTGGATGCT TCCATCTGCT 000480 000481 GGAGTCCATG AAGAAGGTCC ATGAAAATGA AGCCAGCACA ACAACACAGA GCTAAGACAT ACAAAGAGAT GGAGATTAAA 000560 000561 TTGAATGGAA CTTTTAAGCC CCTACATGCC CTTGAAGCCA GATATCCCTG AACTTTTAAT TTATATTAGT TGATAAAGTC 000640 000641 CTTCTTTAGC TTAAGCCAAT TTGAATTAGA GTATTTTTCA CTTGGGGTCC AAAAGAGCTC TCAATACAAA AGTCTGACTG 000720 000721 AGTGCATGAT GTGCTGGTTT CAACCTCAAG GGAACAGGGA AAGGGAAAGA AAGAGGCAGA GGTTGTGAAC AGGACAGTAG 000800 000801 AAGGTGGTCA GGAGACAAAT ATCTGGACTC AACTTTGTCC CTACTGTGTG GCCTTGAATA GTGAGTTAAC CACTCCGAGC 000880 000881 CTCAGTTTCC CCATCTGGAA AAAAAAGTTA GTGGACAGTC ACTAGTTCTC AGACAGAACT CTGTAGCAGC GAGAGGGTAA 000960 000961 TGGGGATTGA GAGTCCCAGA CTTGCATTCT GAGGGACTAG CTCTCCTCTT ATCTATATCA TATACCAGGT TTTCTTGTAA 001040 001041 GGTTTTGTTA GAATGGGTCT CACTGTTAAA ATGGATTAGC TGATCATTTC AGTTCTATTT ATATTAAAGT CTAAATTGAA 001120 001121 TCAAGGCTCA GCTGGGGCCC AGTAAGAATG TAGTGCCTGG TTAATAATAT TTTCTACTCT ATGATAGGAG TTGGCCAGAA 001200 001201 GCCAAGGTCA AAAACTCAAT CCCTGGAGGG TTTATTTGCT TTCTGCAGAC ATAAAAAATT GTTAATAACA ATGATCTGCA 001280 001281 TCCCCAATCT TGAGAGCTGT CTTAGAGATG TGGGTCATTG ATCACAGAAG GGGCTGGGAA AAGGAATGTG GATGATTCCA 001360 001361 AATAGTCATT AGCTCTGCCT TAAATGCCAA TACAAACACT ACTGCCAATG CTCAAGGCAA GCAACCTCTT CATAGCTAGA 001440 001441 ACACAGAGGG TGGTGTGCTT GAAGGCTTTT GTTTCTCCTC AAGACAGTGT AGAAAAAGCT GAGAAAACAA AGAGCACTTG 001520 001521 TTTCACAATT AACTGCACAA CACCTGATGT ATATCCACAG TCCTCTAAAT TAATATGGAT TCGCTTTTCT TTATAAAGAC 001600 001601 AACATACACA TTGTAGTGGA AATCGGATGG GAGGATAATT TTTATGAAAG CATATAACAG TATTTTTATA AAATATAAAT 001680 001681 TATCATTACA GTAAAATATA TTAACTTCAA GGCAAGTTTT GACACTGTAT GCAAGTTTAA AGTATTTCAA ATTTTTAAAA 001760 001761 AGTGTATCTT AACAAATAAA TTTTAGCACC AATTGCCAGA ATTGTTGTCC ACCACTATAG TCAAAACAAT TTTCTTTTCT 001840 001841 TTATTTCAAC TAAAAATTGT GAATGGGACT AAAGTCTTTA TGCAAATATA TACTCCAATA ATAATATTAA TCTTGCCAAC 001920 001921 AGTAGCTGAA TATTTAATTA ACTTTAACAA ACATGTTGAA AGATAATAAA CTAAAAAAAC TATTTTTCCT TATAGTCTCT 002000 002001 GTATAACTAG GTGCTTTCTC ATTAGAAAGC TTATTTTTTC AAAAGTATAT ATAACATAGG TAATTTATAT TAATAAAAAA 002080 002081 TAAAAAGTTG CAAATTT |
Predicted Small Protein
Name | ENST00000414515.3_smProtein_47:208 |
Length | 54 |
Molecular weight | 6104.9749 |
Aromaticity | 0.0754716981132 |
Instability index | 76.6547169811 |
Isoelectric point | 9.05523681641 |
Runs | 9 |
Runs residual | 0.00954901058444 |
Runs probability | 0.0399811576282 |
Amino acid sequence | MKCLTTVGRPWLFQSLPGSRTWKLRPREEEKLDQSQSDNAESRKVPGPLCPCF |
Secondary structure | LEEEEELLLLEEEELLLLLLLEELLLLHHHHLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |