ENST00000415004.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000415004.2 |
Source |
Gencode19 |
Same with |
NONHSAT129913 |
Classification |
antisense |
Length |
945 nt |
Genomic location |
chr9-:454304..492112 |
Exon number |
4 |
Exons |
454304..454606,456201..456703,488957..489066,492084..492112 |
Genome context |
|
Sequence |
000001 GCCTCCTGGC TGTTCCTGGA ACACTCCAGG TGATTCCAAA ACTCCTCCTA GTTAAGAAAC AATGGATCAA GCATCCTCAT 000080
000081 TTTACAGATC GAGGAAACTG AGGCCCAGCA TGGTGCCATG ATGACTCCAG ATCACTGAGG AAAAGACAGA AGCTGATTGA 000160 000161 GGTCCCAGCT TGGTAACAGT TTGAAGAGTT GCAGGACTGG CTGGATGAGT ACTGGCTGCA GCAAATCAGG CTGCCAGGAT 000240 000241 TCTTTATGGC TGTTTCTGCT TCCACTACAG CTGAGTCAGA AAGGTCGCTG CCCCGTGGTG GCACTAGACG CAGTGGACCT 000320 000321 GGCAAGCAAA TGTTTCCGCT ATTAGCTCTC AGCAACAGAG ACTCATTTAT GGTCACCTTG GAAATCTGGG CTTATCGATC 000400 000401 TACAGCCCAA GTCTGCTGAG AAGCTGGAGC TTACTAAAGG GGAAACCTGA GAGCTGTTCA AGCCCCAAAT ATTTTCCACT 000480 000481 TCTGCGTCAC CTCTGCTGTC TGTTAGCAGA GTGGAGGAGA AAATACACAG CACAAACAAC GTGAAAAAAT AGTTACTCTA 000560 000561 TTCATTAAAA GCTGTAACTT CCAGATTGGA CTTGAGAAGC AATTAAGCAA CAGAGGAACC TCATCTACTA TCTGTATTCA 000640 000641 GGCATGCTCA TGAGAACACG CTGCTCCAGC TGGACTTAGA GGAACCCGGT GCATCACAGG CATTCCTGAC AGAGTCTCGT 000720 000721 GGTCCTGCTG GTCCACTCAG TGGTACTCAG TCCTCCTCAT TCTCGGGGAT AGGTTCCAAG ACCCCCAGGG GATGCCTGAA 000800 000801 ACTGCGGATG GTACCGAACC CTACATATAT TATGTTTTTT TCCTATACAT ACATACCTAT GATAAAGCTT AATTTACAAA 000880 000881 TTAGATAGAG TAAGAGATTA ACAACAATTA CAGCAATATA CTGAAATAAA AGTTATGTGA ATGTG |
Predicted Small Protein
Name | ENST00000415004.2_smProtein_245:418 |
Length | 58 |
Molecular weight | 6221.0485 |
Aromaticity | 0.0701754385965 |
Instability index | 57.5438596491 |
Isoelectric point | 10.0220336914 |
Runs | 10 |
Runs residual | 0.0214912280702 |
Runs probability | 0.0253488782901 |
Amino acid sequence | MAVSASTTAESERSLPRGGTRRSGPGKQMFPLLALSNRDSFMVTLEIWAYRSTAQVC |
Secondary structure | LLEEELLLHHHLLLLLLLLLLLLLLLLLLLLLEELLLLLLEEEEEHHHHHHHHLLLL |
PRMN | - |
PiMo | - |