ENST00000415062.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000415062.1

Source

Gencode19

Same with

lnc-C9orf116-1:1

Classification

antisense

Length

1117 nt

Genomic location

chr9-:138395119..138398293

Exon number

3

Exons

138395119..138395547,138396082..138396165,138397690..138398293

Genome context

Sequence
000001 CCACCATCTG GGACACCAGC TGGTCCAGGC ACAGCCTTGC CACAGTCCAG AGAAGGCCAC CTCTAATGGG GCCTGCAGGC 000080
000081 ATTGTGGCCA CAGGAGGAAA GGGCCGGGGG GCCCCTCTCC CCACTCCTGG GGCAGCTCCC TTGCCCTTCC CCAGCCTCAG 000160
000161 GCACTCTCAT CATCTCCGTT GGCCTCTTCT GGGGGCTCTT GGGGTTCATC TCCAGGGTGG AAAACTTGGA GGGCCCCTCC 000240
000241 TGGCAGAGTC AAGGATGGGG TCAGCGAGAC CCCATCCCCT CAGCCCTCAA CCTTTGTTTC ACCCAGAGCC CCTCTGAATC 000320
000321 CTGGGAGCTG GCTCTTTCCA CTCCCCGAGG GGGCCCTCAG GCCCACCCTG GCTGTCCCAG CATGGCCCCC GCGGCTTCTG 000400
000401 CGCTGCACCC TTCCCGTCCC TCCCTGCTCC TCATGGTCAC TAGTGCCTGC TTATCCACTG GGTCATCCCC TCGGCCAGGG 000480
000481 CCCCTCCTGC CCTGGAAGCC CAGCAAGCGC CCACTCGTAG CTCCTCAGCG GGTCCTCGCC GGCCTGTGCC AGGTGCAGGG 000560
000561 GCCAGTGGGA GGACAACAGG AGCCACGCAG GCCATCAGCG CAAGAGCAAA CGCACATGGC AACGTTGGTC CGCTCAGCCA 000640
000641 CTGGTTCTGT GGTGGAACGG TGGATGTCTG CACTGTGACA TCAGCTGAGT ACGAGAACTG CCGGTTGCGG CTTATAAACA 000720
000721 AGATGATGCC CTTGCGGTAG GCCATGTGGG CGGTGAAGTT CAAGGCCAGC TGGAGGTGCG TGGCTGTCTG TTCCAGGTCG 000800
000801 ATGATGTCGT GGTCCAGGCG GCTCCCAAAG ATGTACGGCT CCATAAACCT GCCAGAGACC CCACCAAGGC AAGGGGGATG 000880
000881 AGAGTTCACG GGGCCATCTC CACTGGCTCC TTGCAGGAAC ACAGACGCCC ACCAGGGACT CCCGGGCTCC TCTGTGGGGG 000960
000961 CACTATGGGC TGGGAAGCAC AATTTGCAAC GCTCCCCGTG TGCATGGACA GCAGTGCAGA CCCATCCAGG CCACCCCTCT 001040
001041 GCATGCCTCG TCTCGTGGCT TAACCCCTCC TACCCTCTAC CTCTTCCCGA AGGAATCCTA ATAGAACTGA CCCCATA
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Predicted Small Protein

Name ENST00000415062.1_smProtein_65:316
Length 84
Molecular weight 8492.8498
Aromaticity 0.0361445783133
Instability index 60.0590361446
Isoelectric point 11.8342895508
Runs 9
Runs residual 0.031593038822
Runs probability 0.0374590276551
Amino acid sequence MGPAGIVATGGKGRGAPLPTPGAAPLPFPSLRHSHHLRWPLLGALGVHLQGGKLGGPLLA
ESRMGSARPHPLSPQPLFHPEPL
Secondary structure LLLLEEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHLLEELLLLLLLLLEEE
ELLLLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -