ENST00000415575.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000415575.1 |
Source |
Gencode19 |
Same with |
lnc-SLC35B3-1:1,NONHSAT107632 |
Classification |
intergenic |
Length |
746 nt |
Genomic location |
chr6-:8342170..8343254 |
Exon number |
2 |
Exons |
8342170..8342881,8343221..8343254 |
Genome context |
|
Sequence |
000001 AACCATGAGA AAGCTTTAAA TGGGGATGTA AAATATGATC TGTGGAAGGG AGAGAGCAGC ATGCTGGAGG GGATGATTTG 000080
000081 GCAAGTCCGC TGAAGAACAC AAGCCTCGAC TGCTCCCCGG CGTGGAAGAA GGAAGGCGAT AAATACTGTA ACGGAGGACG 000160 000161 AGGAAGGAGC ACTGAGTTCT ATGTGGAAAG AAAGGGTCAA AAAGAGGAAA ACGCCTATTC ACATGCATGG CGTTTAACAG 000240 000241 ATTTATTAGG TTGTTTGCTG TGTGATGTAA ATCTCCTCCT CTCTCTCCTT GAAATTTCTT GAGTGAATTC TACATTGTTC 000320 000321 ATTCATTCAT GTTTATGTGC CAGCAAGCTT TGGGAGCACT GTAAAAATAA AAAAGGTTAG ACCACTGTTA GACATCTGGG 000400 000401 AAACATCTAT GTTAGAGAAG GACTATATAT TAATTTATCT CATTTATGGG AGGCAAATAC TATGATTATT GAAGGTACAT 000480 000481 CTCTTTCTTT ATGGATGGAG TACATCTTAT TTTTCTAAAA TTTGTATTTG AACCTATTTA TTTCTAATTG TCAAAAATGT 000560 000561 GAAGTGAGAA ACTTAAAAAC TTTTTAGTTT CTCTTGTCCC ACCATTTTAT GTACTTCCAG GTTGTCAAAT AATTTGGAAT 000640 000641 TTTAGACTTA GATAATTCTC TAATGTATAT TATAGATCTT CTATTTCAAT AATTAGCTTA TATTTTAATT AAATTGTATA 000720 000721 ACTGCATTAA AATATACTTA ACTATG |
Predicted Small Protein
Name | ENST00000415575.1_smProtein_461:517 |
Length | 19 |
Molecular weight | 2193.6214 |
Aromaticity | 0.222222222222 |
Instability index | 66.15 |
Isoelectric point | 3.79461669922 |
Runs | 5 |
Runs residual | 0.0116959064327 |
Runs probability | 0.0120650061827 |
Amino acid sequence | MIIEGTSLSLWMEYILFF |
Secondary structure | LEEELLLHHHHHHHHHHL |
PRMN | - |
PiMo | - |