ENST00000416381.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000416381.1 |
Source |
Gencode19 |
Same with |
lnc-BHLHB9-1:5 |
Classification |
intergenic |
Length |
2012 nt |
Genomic location |
chrX+:102094836..102121752 |
Exon number |
3 |
Exons |
102094836..102094900,102100785..102100948,102119970..102121752 |
Genome context |
|
Sequence |
000001 CCCACAGGAC CTTGCAGTGG GATTTCATCT GCACCATCAG CTTCTTCAGA GAGAGAGGTT GTTGACTCTT CATGTGGATG 000080
000081 TCTGAGCTCA TATCAGGTGT CTGAAAGAGG CAGATTCTGA GGATTTGGGT CATGATGGCT GCCAAAGCTT CTACTCCTGA 000160 000161 CTTAAAGGGC AACAATCCTA GGAGACCACC AGCACTTACA TCCCTGGTAG GACATGACAC CTGCTTATGG CTCAGAAGTG 000240 000241 ACAAAAGAGA ATTATCAGGA TGGCAGTCCT TATAACCAGA TGCTTATCAA CATTCTTCAC TACATTCTGA AGATGAATTT 000320 000321 CTACAAGGGA AATTGTTTAT GTAAGTGGTG TGTACCCTTT GATATGTATT GACATAGTGG CACACATAGA GTTGTGCCAT 000400 000401 TTAAACTCCC CAAGGGGAGG CATGTGAGGT CGGCCACAGA GGACTGAAGA AATTAGTTAA TGCTGACATC CTATCACATA 000480 000481 GGGTGGGTCC TGGACTCCGT CATGGACCTG CTGTCATGCC ATTGCCACAA TTGGAAGACG TGGAAGTGAT CAGATGCAAT 000560 000561 CAAATTTTGT ACACAAGCAC ATCCTGATGT AGCGATGAGG GAAAGGGGGA AGAGGAATGA TCATTGCTTG GACTTACAGG 000640 000641 ACAGAGGCAG AAGGGCTAGG ACACAGGCAC TCTTTATACG CATTCTTTTT TTTTTTTTTT TTTTGAGACG GAGTATCGCC 000720 000721 TGTTGCCAGG CTGGAATGCA ATGGTGTGAT CTCAGCTCAC TGCAACCTCC GCCTCCTGGG TTCAAGCGAT TCTCCTGCCT 000800 000801 CAGCCTCCTG AGTAGCTAGG ACTGTAGGCA CGCACCACCA CGCCCAGCTA ATTTTTTGTA TTTTTAGTAT AGTCGAGGTT 000880 000881 TCACCATGTT GGCCAGGATG GTCTCCATCT CTTGAGCTCG TAATCCGCCT GCCTCGGCCT TCTACAGTGC TGGGATTACA 000960 000961 GGCGTCAGCC ACCACACCCG GCCCTATATG CATTCATTTT TATGTAAAAC ATATGCATCA ATTCTTTTGT ATGAAAACGT 001040 001041 TTGGTCATTA CTGTGGTACA ACAGAAGACC AGGTCAGTAC CATATTTTTT TTTCATATGT ACACGGATTT TTATTTTGTT 001120 001121 TTAGACATTG TCTTACACAC AATAGACATT CAGTATTTGT TGAAATTAAT GAAAGAAAAG AGAAACATGA AAACGGTCTG 001200 001201 AGAAGACAAT AATCTGCTTT TTAATTTATA GACAGCAATT AGGTCAAACA ATTATAGCAA TGATGACAAA GAACAATATC 001280 001281 TGAGGTACAC TCAAAACCTT ATGAGGGTTA TTTGCCAGTT TTCCTGGCTA TTTCTACACC CTTTGATCTC TAGTGAATGT 001360 001361 TTCTACTTAC AACTACATAT TTTGTAAGTT TTGCCTACTG TATTTCAATC AACACTGTAA AAAATGAAGA GAGTCTTTTT 001440 001441 GGTTCAAATT TGGTTTTTAG TTAATTATGT GATGTGTATA TGATTTTTTG TTACCTTTTC TGTATAGATA TCAGGAGAAT 001520 001521 CGAAAATATG TTGATGGTGG AATTGTGGTA TGACATTTTT ACTGACTACT ACTCTGCAAA AGTTTTATCT ATGAGCTCTA 001600 001601 TGGGTTGTTC CTGGCTTTTG AAAATTTACT TTAAGGAAGT GTTTTTGGAA ATGGATTATA AGTATACAAG TATGCAATCT 001680 001681 TATGTATTTG CAACTGTCTA AGATGTTATG ATACTTTCCT CCCTGCAATC TGGCATTCAT CCATTCAAGA CATTTTAATT 001760 001761 GAACTCTTAC AATGTTCTTA ATACTATGAT AAGCCCTGAA GGTAAACTGT GACTAAAAAT GTTGCAGGAT AAAATACAGG 001840 001841 ATTCCTAGTT AAATTTGAAT TTTAGATAAA CAACATTCTT ATACTAAAAA TTATTCCATG TTTATCTGAA ATTCAAATTT 001920 001921 AGCTGAGTGT CCTGTAACTT TTTATTTTAT TTGTTTACTT GTTTGTCTGT GATAAATATG GCAGCCCTAG TAAAAATAAA 002000 002001 TATAGCCCCT GA |
Predicted Small Protein
Name | ENST00000416381.1_smProtein_131:274 |
Length | 48 |
Molecular weight | 5206.9383 |
Aromaticity | 0.0425531914894 |
Instability index | 64.3489361702 |
Isoelectric point | 9.77606201172 |
Runs | 7 |
Runs residual | 0.0173404255319 |
Runs probability | 0.0434552199259 |
Amino acid sequence | MMAAKASTPDLKGNNPRRPPALTSLVGHDTCLWLRSDKRELSGWQSL |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLEELLLLLEEEEELLHHHHLLLLLL |
PRMN | - |
PiMo | - |