ENST00000421252.2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000421252.2

Source

Gencode19

Same with

lnc-MTX3-1:1,NONHSAT102374

Classification

antisense

Length

460 nt

Genomic location

chr5-:79070171..79112013

Exon number

5

Exons

79070171..79070271,79073818..79073941,79097428..79097537,79099661..79099714,79111943..79112013

Genome context

Sequence
000001 CAGCCTGGGT CCTAGAGTGA GGATGACATG AGACAGAGCC ACAGCCAACC CACAATGGAC GTATGGCAAA AGGTCTCATT 000080
000081 CTGATACCCA GGCTGGATTC CAGTGGCACG AACATGGGAC TACAGAGCTG CTTCCAACCT GACGGCAGAT GCTGCTGGCA 000160
000161 CTTGGTCCCC TTCACCCGCG GCTAGCGAGG GTGCATGCGC AGTTGCATTA GACAGTTTTC GACATACCTT CTCAGATGGA 000240
000241 GTCTTACTCT GTCACCCAGG CTGGAGTCCA GTGGCATGAC CTCAGCTCAT TGCAACCTCT GCCCCACCCG GGTTCAAGCG 000320
000321 ATTCTCCTGC CTCAGCCTCC TGAGTAGCTG GGATTACAGG AGAGACAGAA CAGCTGAGGA AACAGCAGAA CGGTGGAAAA 000400
000401 TTTTTGAAAG TGTTTTGAGC CCACCCAACC TGAGGAGAGC ATTCAAAGAA AAACAGGAAG
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Predicted Small Protein

Name ENST00000421252.2_smProtein_194:346
Length 51
Molecular weight 5690.6257
Aromaticity 0.06
Instability index 80.55
Isoelectric point 9.21173095703
Runs 8
Runs residual 0.0046783625731
Runs probability 0.0289259848084
Amino acid sequence MRSCIRQFSTYLLRWSLTLSPRLESSGMTSAHCNLCPTRVQAILLPQPPE
Secondary structure LHHHHHHHHHHHHHHHLLLLLLLLLLLLLLHHHLLLLLHHHEEELLLLLL
PRMN -
PiMo -