ENST00000421252.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000421252.2 |
Source |
Gencode19 |
Same with |
lnc-MTX3-1:1,NONHSAT102374 |
Classification |
antisense |
Length |
460 nt |
Genomic location |
chr5-:79070171..79112013 |
Exon number |
5 |
Exons |
79070171..79070271,79073818..79073941,79097428..79097537,79099661..79099714,79111943..79112013 |
Genome context |
|
Sequence |
000001 CAGCCTGGGT CCTAGAGTGA GGATGACATG AGACAGAGCC ACAGCCAACC CACAATGGAC GTATGGCAAA AGGTCTCATT 000080
000081 CTGATACCCA GGCTGGATTC CAGTGGCACG AACATGGGAC TACAGAGCTG CTTCCAACCT GACGGCAGAT GCTGCTGGCA 000160 000161 CTTGGTCCCC TTCACCCGCG GCTAGCGAGG GTGCATGCGC AGTTGCATTA GACAGTTTTC GACATACCTT CTCAGATGGA 000240 000241 GTCTTACTCT GTCACCCAGG CTGGAGTCCA GTGGCATGAC CTCAGCTCAT TGCAACCTCT GCCCCACCCG GGTTCAAGCG 000320 000321 ATTCTCCTGC CTCAGCCTCC TGAGTAGCTG GGATTACAGG AGAGACAGAA CAGCTGAGGA AACAGCAGAA CGGTGGAAAA 000400 000401 TTTTTGAAAG TGTTTTGAGC CCACCCAACC TGAGGAGAGC ATTCAAAGAA AAACAGGAAG |
Predicted Small Protein
Name | ENST00000421252.2_smProtein_194:346 |
Length | 51 |
Molecular weight | 5690.6257 |
Aromaticity | 0.06 |
Instability index | 80.55 |
Isoelectric point | 9.21173095703 |
Runs | 8 |
Runs residual | 0.0046783625731 |
Runs probability | 0.0289259848084 |
Amino acid sequence | MRSCIRQFSTYLLRWSLTLSPRLESSGMTSAHCNLCPTRVQAILLPQPPE |
Secondary structure | LHHHHHHHHHHHHHHHLLLLLLLLLLLLLLHHHLLLLLHHHEEELLLLLL |
PRMN | - |
PiMo | - |