ENST00000422542.2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000422542.2

Source

Gencode19

Same with

NONHSAT119491

Classification

intergenic

Length

929 nt

Genomic location

chr7+:22896147..22901021

Exon number

3

Exons

22896147..22896175,22896592..22896635,22900166..22901021

Genome context

Sequence
000001 TGGAGTTTCA AGATGCTGAT GAACTTAAGG TCTGGCGCTT GAAAGAATCA GTGAAGCTTT TCAAGTAGAG GAGTACTCTA 000080
000081 CTTTGAAGAA AGGAATGGAA CAGAAGGTGT CTGCATAACT AAATGGGGAT CTAGAGAAAG TGGAGACTGC CTCTGGAGCA 000160
000161 GGGAGGTGAG TGGACCAGAT CACTGTGGGC CTGGGCCTAC TCAGCTGATT TTCAAGCTAA AACCAGGGGT AACTTTTCCT 000240
000241 CTTGAGACGA AAGCCATGCT CACATTCTGT GAACAGCCAG AGATGTGTTC GAAAGGCTTA CTTTTATTTT GTACTAGAAA 000320
000321 AGATTGTCTT TCCAAAATTT ACCTCGTATT CATAAACTGG AAAGTTCTGA TGGCAATATT TTGTTACAAA ATTGTCATTA 000400
000401 ATCACAATCC AGGATTATGC CACCATGACT AGAAGGCCCC CTAATGGAGT TTATCTGCAC TGCAAGGGGC CAGTTGTCTC 000480
000481 AGAATCATCC TCCGTTGACA TCTCCATCTC CAGGACAGCT CCACACTAAT CTGTTTCAAA GACAAAATCC AGTCTAATCA 000560
000561 GTTTGATGTA TGTTTCTGGG AATAGAGCCG AATGTTGTAG CTGATGGAAT GGAGTCTCAT ACCATTGATT TTGCAGCTGG 000640
000641 ACAAGTGCCC TGCCATGTTA CTGCCACTCT TTAAGGCAGA ATAGAGCACA TTGTATCATT TATAGGCCTC TCACAGTGAG 000720
000721 AAATATGTGG AACTTTGGAA ATCAGAATCT AAAACTGCAG TCCAATGGGG TAGCCACTAT TCACATGTGC TATTGAGTAC 000800
000801 CTAAAATGTG GCTAGACCAA GTTGACATGT GCTGAAGGGT GAAAAACACC AGGAGTGAAG AATTAACTTG AAAAAAATGT 000880
000881 AAACTATCTC AATTTTATAT TGATTACAAA TTAAATGATG TTTTGAATA
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Predicted Small Protein

Name ENST00000422542.2_smProtein_443:556
Length 38
Molecular weight 4145.6387
Aromaticity 0.0540540540541
Instability index 58.3675675676
Isoelectric point 8.04498291016
Runs 7
Runs residual 0.009422266303
Runs probability 0.0285789991673
Amino acid sequence MEFICTARGQLSQNHPPLTSPSPGQLHTNLFQRQNPV
Secondary structure LEEEEEELLLLLLLLLLLLLLLLLHHHHLHHHLLLLL
PRMN -
PiMo -