ENST00000422542.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000422542.2 |
Source |
Gencode19 |
Same with |
NONHSAT119491 |
Classification |
intergenic |
Length |
929 nt |
Genomic location |
chr7+:22896147..22901021 |
Exon number |
3 |
Exons |
22896147..22896175,22896592..22896635,22900166..22901021 |
Genome context |
|
Sequence |
000001 TGGAGTTTCA AGATGCTGAT GAACTTAAGG TCTGGCGCTT GAAAGAATCA GTGAAGCTTT TCAAGTAGAG GAGTACTCTA 000080
000081 CTTTGAAGAA AGGAATGGAA CAGAAGGTGT CTGCATAACT AAATGGGGAT CTAGAGAAAG TGGAGACTGC CTCTGGAGCA 000160 000161 GGGAGGTGAG TGGACCAGAT CACTGTGGGC CTGGGCCTAC TCAGCTGATT TTCAAGCTAA AACCAGGGGT AACTTTTCCT 000240 000241 CTTGAGACGA AAGCCATGCT CACATTCTGT GAACAGCCAG AGATGTGTTC GAAAGGCTTA CTTTTATTTT GTACTAGAAA 000320 000321 AGATTGTCTT TCCAAAATTT ACCTCGTATT CATAAACTGG AAAGTTCTGA TGGCAATATT TTGTTACAAA ATTGTCATTA 000400 000401 ATCACAATCC AGGATTATGC CACCATGACT AGAAGGCCCC CTAATGGAGT TTATCTGCAC TGCAAGGGGC CAGTTGTCTC 000480 000481 AGAATCATCC TCCGTTGACA TCTCCATCTC CAGGACAGCT CCACACTAAT CTGTTTCAAA GACAAAATCC AGTCTAATCA 000560 000561 GTTTGATGTA TGTTTCTGGG AATAGAGCCG AATGTTGTAG CTGATGGAAT GGAGTCTCAT ACCATTGATT TTGCAGCTGG 000640 000641 ACAAGTGCCC TGCCATGTTA CTGCCACTCT TTAAGGCAGA ATAGAGCACA TTGTATCATT TATAGGCCTC TCACAGTGAG 000720 000721 AAATATGTGG AACTTTGGAA ATCAGAATCT AAAACTGCAG TCCAATGGGG TAGCCACTAT TCACATGTGC TATTGAGTAC 000800 000801 CTAAAATGTG GCTAGACCAA GTTGACATGT GCTGAAGGGT GAAAAACACC AGGAGTGAAG AATTAACTTG AAAAAAATGT 000880 000881 AAACTATCTC AATTTTATAT TGATTACAAA TTAAATGATG TTTTGAATA |
Predicted Small Protein
Name | ENST00000422542.2_smProtein_443:556 |
Length | 38 |
Molecular weight | 4145.6387 |
Aromaticity | 0.0540540540541 |
Instability index | 58.3675675676 |
Isoelectric point | 8.04498291016 |
Runs | 7 |
Runs residual | 0.009422266303 |
Runs probability | 0.0285789991673 |
Amino acid sequence | MEFICTARGQLSQNHPPLTSPSPGQLHTNLFQRQNPV |
Secondary structure | LEEEEEELLLLLLLLLLLLLLLLLHHHHLHHHLLLLL |
PRMN | - |
PiMo | - |