ENST00000422909.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000422909.1 |
Source |
Gencode19 |
Same with |
lnc-ANXA1-3:1,NONHSAT131903 |
Classification |
intergenic |
Length |
624 nt |
Genomic location |
chr9+:76188531..76194414 |
Exon number |
3 |
Exons |
76188531..76188760,76192785..76192868,76194105..76194414 |
Genome context |
|
Sequence |
000001 GGAAGATAGA GTTGTACTGT GACCACGGTT ACCTAGGAGT CTGTATTTTT AGTTTAATTT TTTATTGATC TATAAAGTGG 000080
000081 TGCACCAGAG CAGGCTAGTC CCAGGTAGTT AACTATGCAT AAGCAGTTGC AAAGTTCGAT TTTGCTGTAT AATATTGAGC 000160 000161 CACATATTCT TCACAGTATA TTTTGCTCAT ACCTACTGCA GACTTCCACA TGACAGCTGA ATTGCAAACT GTAAATGGCT 000240 000241 GAAGACAGAA GACTTATTAT AGATTTTATA TCCAGCCCAT GAGGATTTTG ACTGATTCCA TTGAGCAAGC TCAGGTGAAA 000320 000321 AACGGAAGGG CCAAGACAAA TTAAGTGACT TGTCCAGGAT CACACAACCA GTTATTAGCT CTACTGAGAA AAAAATACAC 000400 000401 ATCTCTTGAC GCCCAGATGA GTGTTTTGTT TTCGTTATTT AGCATTTCGA GTGCTTCTGT ACAACATACC ATTTGTATTC 000480 000481 TTTGAAACAA ACTCTTCGGA TATTTCCAGG TGTTTTTCAC ATTTCTGACC TGAGAGAAAG TATACCTAAT GGTATAAGTA 000560 000561 GACTTAAAAT CTATTTAAAA TTCTCAAAAG TTTCTAATTC TGTTCTTTTA GTAACTACTT AAAA |
Predicted Small Protein
Name | ENST00000422909.1_smProtein_416:484 |
Length | 23 |
Molecular weight | 2383.8235 |
Aromaticity | 0.0909090909091 |
Instability index | 43.6 |
Isoelectric point | 6.48773193359 |
Runs | 8 |
Runs residual | 0.127272727273 |
Runs probability | 0.0311561561563 |
Amino acid sequence | MSVLFSLFSISSASVQHTICIL |
Secondary structure | LEEHHHHHEELLHHHHHEEEEL |
PRMN | LHHHHHHHHHHHHHHHHHHLLL |
PiMo | i????????????????????? |