ENST00000423112.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000423112.2 |
Source |
Gencode19 |
Same with |
NONHSAT130022 |
Classification |
intergenic |
Length |
552 nt |
Genomic location |
chr9+:3526723..3671634 |
Exon number |
6 |
Exons |
3526723..3526777,3546778..3546912,3568794..3568889,3602523..3602584,3606693..3606738,3671477..3671634 |
Genome context |
|
Sequence |
000001 TGTGCGTGGG CGCGAGTCGG CCTCCCGCGG TGCCGCCGCA GCGTGGCGCG GAGAGGCAGG GGCATCCAGT GGTTCAAGGT 000080
000081 TACAATAAGC TGTGATCGTG CCACTGCATT CTACCTGGGA TGACAGAGTG GGACCCTGTG CCACAGAGTG AGACCCTGTC 000160 000161 TCAAAAAAAA AAAAACTATG TAAATCCAAG AAAAAAAGAA AACAGCTCCT GTTGCCTTTT GCCTCTCATC CAGAAAGGTA 000240 000241 TCCATTTGCC TTTCTAATAT CTCTTCATCC TGTCAGGCCA CAAATGGAGA CGACTCACCT GTATTGTACC TCTCCAAGTT 000320 000321 CTGGAAAGTC GATGGAGGGT TTACTCAGAA CTTCAATCTA TCCAGAACTG AGTTTTGTTT ATGGTGTGTG CCAGGCAGTG 000400 000401 GATTAAACAG TAGTGCATAT CACTTGGCTG AAGTGACAGG AATAAAGAAC AGAATGCATC CACTCCTCCA GTCTCATTAA 000480 000481 GCTGCCTCTT TCTCCTGAAA TTGGATTGGG ATTCCAGGAC ACCTCTCAAC CTACAGGAAA CACTGGATCT AA |
Predicted Small Protein
Name | ENST00000423112.2_smProtein_119:256 |
Length | 46 |
Molecular weight | 5227.0471 |
Aromaticity | 0.0666666666667 |
Instability index | 66.54 |
Isoelectric point | 9.13922119141 |
Runs | 7 |
Runs residual | 0.00669191919192 |
Runs probability | 0.0441744265273 |
Amino acid sequence | MTEWDPVPQSETLSQKKKNYVNPRKKENSSCCLLPLIQKGIHLPF |
Secondary structure | LLLLLLLLLLLLLLHHHHLLLLLLLLLLLLLEELHHHHLLLLLLL |
PRMN | - |
PiMo | - |