ENST00000424349.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000424349.1

Source

Gencode19

Same with

lnc-MRPS25-1:4

Classification

intergenic

Length

3792 nt

Genomic location

chr3-:14984291..14989014

Exon number

2

Exons

14984291..14987661,14988594..14989014

Genome context

Sequence
000001 GCGCACCGGA ACGCCGCAGC CGGCGCTCGG TCCATCCGGC CCGTGGGCTG TGGGGCCCCG GGCGGCGGCG GCTACGTAGC 000080
000081 TGCCGCCGGC CTTGGCCGCG GCCGGGCGGG CGGATATGTG GCTTAAATGG CGCAGGCGTC GGGGCCTAGA GGCTGAAGGG 000160
000161 CTGGTCGTCC TAAAAACTCG TGGACGTCGC GCACGGTTAC CCGGACGCAG GCCCGCCCCT CTGGGGAACC GCGAGCTCCT 000240
000241 CGCAGCTGGG TGGGGACCGT CCTCGCAGTG GCGGCCTCCA CCCTGCCTTC TCGCTTAGCC AAGGCTTCTG GAAGGCTCGC 000320
000321 AAAGTGTCTG TTGTTGGAAG AAGCCGGGCC CTGACTGGCG CGACGGATTC TCCCAGCCGC TCAGCAGAGC GTCTGTAGGT 000400
000401 CGGAAGTGGG GGTTGTATTG GAATATGCTT TTTGTCTAAT GATGTTAGAT AAAAAGCAAA TTTGGAGCAG TTTTCTTATT 000480
000481 CGAGTTCAAA ATGGTTCATA AAGCAGCGAA GACAACTCAA AACATCAGTA ACACATTTGG CCCAGGAACT GCTAACAAAC 000560
000561 ATACAGTGCA GTGGTGGCTT AAGAAGTTTT GCAAGGAAGA GAGCCTTGAA GATGAGGAAC GTGATATGGG CCATGGGAAG 000640
000641 TTGACAACGA CCAATTGAGA GCAATCATTG AACTACATGA AAAATTACAG AAGAACTCAG CGTTGACTAT TCTACGGTCA 000720
000721 TTAGGGTCGT TCAGCATTCG AAGCAAATTG GAAAGGTGAA AAAGCTTGAT AAGTGGGTGC CTCATGAGCT GAGCGGAAAT 000800
000801 CAAAACTATC GTTTTGAAGT GTAGTCTTCT TTTATGCTAC GCAACAACAA ACCATTTCTC AATCGGATTG TGACATGTAA 000880
000881 TGAAAAGTGA ATTTTATACA ACAACCAGCT CAGTGGTTGG ACCAAGAGGC AGCTCCAAAG CAGTTCCCAA AGCCAAACTT 000960
000961 GCACCAAAAA AAAGGTCATG GTCACTGTTC GGTGGTCTGC TGCCCATCTG ATCCACTACA GTTTTCTGAA TCCTGGTGAA 001040
001041 ACCATTACAT CTGAGAAGTA TGCTCAGCAA ATTGGTAAGA TGCACCGAAA ACTGCAATAC CTGCTGCCTG CATTGGTCAA 001120
001121 CAGAAAGGGC CCAATTCTTC TCCACGACAA CACCTGACTG CGTGTCGCAC AACCAGTGCT TCAAAAGTTG AAGGAATTGG 001200
001201 GCTACAAAGT TTTGCCTCAT CCACCATATT CACCTGACCT TTCGCCAACT GACTACCACT TCTGCTAGCA TCTTGACAAC 001280
001281 TTTTTGCAGG GAAAACACTT CAGCATGGTG CAGAAAATGC TTTCCAAGAG TTCGTCAAAT CCTGAAGCAC GGATTTTTAT 001360
001361 GCTACAGGAA TAAACAAACA TTTCTCATTG GCAAAAATGT GTTGATTGTA ATGGTTCCTG TTTTGATTAA TAGAATATGT 001440
001441 TTTAGCGTAG TTACAATGAT TTAAAATTCG CAGTCTGGAA ATTTAATTTT TGCATCAACC TAATATTTCT ATGGTAAATC 001520
001521 CTTGCAAACA TGGAAACAAT GCATTTGGCC CAGTGCTTTG TGGTTGTGTA CTCTTTTTCT TTGTTTTTTT AATAGATGGC 001600
001601 ATTGGCCGGG CATGGTGGCT CATGCCTGTA ATCCCAGCAT TTTGGGAAGG TGAGGTGGGT GGATCACCTG AGGTCAGGAG 001680
001681 TTCAAGACCA GCCTGACTAA CATGGTAAAA CCCCATCTCT ACTAAAAATA CAAAAAAATT AGCTAGGCGG GGTGGCGGGC 001760
001761 ATCTAATTCC AGCTACTTCA TGAGGCTGCG ACAGGAGAAT CATTTGAACT CGGGAGGCAG AGGTTGCAGT GAGCCGAGAT 001840
001841 CACACCATTG CACTCCAGCC TGGGCGATGA GCGAAACTGT CTCAAAAAAA AAAAAAGTTG GGGTCTCGCT GTGTTGACCA 001920
001921 GGCTGGTCTC GAACTCCTGG CCTCAAGTGA TCCTCCCATC TTGGCCTCCC AAAGTGTTAG GATTACAGGC GTGAGCCACC 002000
002001 ACACCCTGCC TGGTTGTGTA CTCTTTTAAA TACTAAGTTT TTAATGTTAA ATGCTGCTTT TAGATACACT GTAAAAATAC 002080
002081 ACCTATCAAT GAGTTTTTTT ATTAAAAACA TTGCAATTGT ACTAGACTTT AAATACTAAG CAATAATTCA GGCTTCAATG 002160
002161 TTGGTTTATA GTTTTCTCAT TTCTTTCATT TAATACCTCT GTAAAATGAA GCAGTTACTT CCATTTTCCT GAGGTGAGAT 002240
002241 AAGTGCCCTG CACAATGTTA TAGGCCCAGT AAGTGAGACT GGAGCTCTGA TCTAATCCCT TTGACATTAA AGTTTGTGCA 002320
002321 GTAAACCAGC TATGTCAGTT TGCCACATTT GTAATAGTGT TCAATAAATT TTCACTTAAA GGTTTAATAT TAAAGTAGTA 002400
002401 GCAAGAATTC ATAACCTTAA TTGGCTTTAA CAGCTTTTCT TTCCCTGAAA ACAGATGCAT ATGTACACAT GCACACAGAT 002480
002481 TGCTTACAAT ATCAGCACGT AAAAGGCCTT TGCACATTGA AGTCGGCACT GCTTTGGTGC CTTTTTTGTT TTTTGGCTCG 002560
002561 GTGTTTTGAC TGCAAGTCTT TTTGGATAGA ATTTTATAGT TAGAAAGTAG CTAACACTTG GGTTTTATAG GCACAAAAAA 002640
002641 CAAGTCTTAT ACTAGCTGTA CTTTATTTTT TGAGTTCTTA TTAATGAGGA ACATCCACTT TTGCATTGAC AGTGATTTCA 002720
002721 AGATTGCTTT ATCAGCCTTT AAAGGATTCT TGACTAGTCG TGCACATCAG AACTGCCAGG TCCCCAGTGG TTCTGAAGCA 002800
002801 GTAAGCTTTG GGTGGGCTCT GGCATCAGCA CTTTCACTAA GCTTCACAGA TAATTCTGAT GCATACTCCA GGCCTGAACC 002880
002881 ACTGATCAAT TTGAAACATG CATAACAAAG CAAAAAAAGT TTTGTTTCAC CTTTTGAAAT ACAGTTAACT CTTTTACCAT 002960
002961 GCCAGAGATC ATTCAGAGAG ACAGGTCGTT GCTCCGGAGT GATACAGATC TGGCAGTACC CAGCCCTTGT GTGTGTGCGT 003040
003041 TAGCTCAGCA CCTGCCCACA CTGCGAGCCC CCGTAGGATG TGCCTTGTCC TTCCCTGTTT CAGCACTTAA CACACTACCT 003120
003121 GGTACAGAGT ATGTAGTGGG CATCTGTTGA ATGAATGCTT TTCCCAGTAG CAGTGTATTC ATACAATATT AATATAATTG 003200
003201 TCCCCTGGCT TACAGATAAA AATGAAAGCA TCAAGTGCCC AGTGAGTGAG ACCCAGGTGT TCTTCCTCCA CCCCTAGTGG 003280
003281 TCCCCTGGGC AGGTCTTTTT TTTTTTGTAA CACTCACCAG TCTGTTCTGT AGTCAATCAT TGATTGACTT GTCTGTGAAC 003360
003361 TTGGAGGAAC TGTTTCATAG TTTCATTAGC ACAGAGTAAA CATGTTTGCC ATGCAAGGTT ATTTTGCATC TGCATTTAAG 003440
003441 TGATAATGTT GAATCAATGA AAAGTGTTGA TTAAGCAGTA GTTGTAGATA TGCTAAGTTT TTCAAATTAC TAATATCAAG 003520
003521 TGGAGATTGT TTTTACTTTT AAGGGTATTG CTTTTGTGAT AGCATAAATA ATGGTTTTCC TTTTTTGTAA TGTAAATTAA 003600
003601 TTGCTGGCAA CTTTTGTATT CCCATAGACT GGGGAAGCTT AATTGCCTTT ACAAGTACTT ATGTACAACT TTGTATCAAA 003680
003681 TTTTCTGTAA TAGTTTATGC TTTAGTACTA TATATGTACT AATAATTTTA TCTGACTTCT GTTTATATCA TTTGTACAAT 003760
003761 TACATGGTTG TAAAATAAAC TTTTAAACCT CA
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Predicted Small Protein

Name ENST00000424349.1_smProtein_977:1156
Length 60
Molecular weight 6800.8677
Aromaticity 0.0847457627119
Instability index 58.4949152542
Isoelectric point 9.86993408203
Runs 9
Runs residual 0.0080858342404
Runs probability 0.0426406798956
Amino acid sequence MVTVRWSAAHLIHYSFLNPGETITSEKYAQQIGKMHRKLQYLLPALVNRKGPILLHDNT
Secondary structure LEEEELLHHHHHHHHLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLLLLLEEEELLL
PRMN -
PiMo -