ENST00000424415.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000424415.1

Source

Gencode19

Same with

lnc-RP11-706O15.1.1-2:4,NONHSAT136141

Classification

intergenic

Length

2194 nt

Genomic location

chrX-:3809479..3820041

Exon number

3

Exons

3809479..3811392,3817257..3817463,3819969..3820041

Genome context

Sequence
000001 GTTAAGAAAA TGTGCCAAGA TTACCTCAGT AATTCTGGTC TGTGTTCTCA GGAGACCCTG GAAATAAACA ATGTGTCTTC 000080
000081 TGTGGCTTCA GCGTCACCTA GTGCAGGCTG CCATTCAACA AACGCATTGT CAACAGTCAA CCAAAAGAAA CCCATTGGCC 000160
000161 ACCATACCCT GAGGACTAAC CCTGACACAG ATGCCCTTCC AGATGCCCTC AGTAGTCTAA CTGATTCCAT CGCCCCAGCC 000240
000241 TTGGGGGAGA AGCACTGCTG CCTATGCACT CCATTTACAG GTGAACTGTC ACCCCTACAA CTCAGCTTGC AACCAGCCCT 000320
000321 GGCCACCACC AGTTTCCCCA CACTGAGCTG AATATTGGAC ATGCCCATCT TAGACATTCC AGCCCATTCT GAAATTCCAC 000400
000401 ATCGATTCAC CCGACAAAGT CTGAAGTTCC AGGGCAATTT ATCTGGAAAA GCTCACCTGG AATCATGTGT CATTTCAACC 000480
000481 AACAACTGTC GAAGAGGACG TGGCATCAAA ACCAAGGTTA TCAATTATTT ATAAGGGTTG TGTGGTGGTT GGTCCAAGCA 000560
000561 TCTCTCCTTC ATGCCATCAC TCCTTTCAAG AGCTGCCTCT ATTTTCTAAT TTAGCACAGG AATTTAGATG CCCCTAAATA 000640
000641 AGTAGGCATC CAGTATCTGC CCACACCAGT TTTAGTGAGA GTACATATGG AGACACTGCC ACCACCCCTG CTCTCCTACT 000720
000721 GCATACCCCA CCATGCCAAA GCATGGTGGC TCACACCTGT AATCCCAGTG CTTTGGGAGG CCAAAGAGGA GGAACACTTG 000800
000801 AGGCCAGAAG TATGAGACCA GCCTGGGCAA CATAGTGAGA CCTCATTTCT ATAAATAAGT TAAAAAAACA AAAAAATAGG 000880
000881 GCACAGTGGT GCACATGTGT GGTCCCAGTT ACTCAGCAGG CTGAGGCTGG AAGATCACTT GAGCCCAGGA GTTTGAGGCT 000960
000961 GCAGTGAGCT AGGATTATGC CACTGCACTC TAGCCTGGGC AACAGAGAGA GACCCCATCT CTAAAAAGAG GGAGAAGAAG 001040
001041 GAAGGAGGAG GAAGAAGAGG AAGAGGAGGA GGAGAAATAC TGCTCTTTCT CAGGCCCAAG GTAAAAAGGT TTTTGGTCTC 001120
001121 ATGTTGACCA GAAAGACATT GATATTTAAT TAAGCAATAT AAAAAGGCTC ATTGTTAGGA TTAAAGAGTA AGTAAAATCA 001200
001201 ATATTGAGAT AGGAGGATGG AGGACACCAA CTGAGTTCCG ATCCCAATGA AGAGGAGAAA AAGCTACAAC TATCTAGGTG 001280
001281 AAATATCTAC TTATCCTAGA AGAAGCCTTT TGACAGCAAC ATAAAATTCA TACCTATAGG TTTTTAATTC CTATGGATGC 001360
001361 CGTAGCAAAT AACAAAAACT TGGATGGTGT AAAGTAACAG ATGTTTACTC TTTTCCAGTA TTGGAGACCA GGAATCTGAG 001440
001441 ATCAAGGTGT GGGCAGGGGT GCGCTCCCCC TGGAGGTTCT AGGAGAGGAT CCTTCCTGCC TCTTCCAGCT CCTGGTGGCT 001520
001521 CCAGGTGTCC CTGGGCTTGT GGCCACATCA CTACATTCTC TGCCTCCATC TCCACGTGAC CTTTTCCTCT GTGTCTGTGT 001600
001601 CTCCTCTTCT GTCTCTTAGA AGGACACTGG TCATTGGATT TAAAGGCCAC CTGGGTAATT TATAGTGATC TAATCTCAAG 001680
001681 AATCTTTCCT TAATTACATG CAAATACTCT TTATCCAAAT TAGTTTGCAT TCACAAATTC TGGAGCTTAG TACTTGGACA 001760
001761 TATATTTTGG GGGGTTGATG GTTGGAGGGG CTTTTATTCA ACTCAGTACA TCTTAATAAG GAATTAATGC CCCCCAACTT 001840
001841 GCCTTACAAG TCATATATTA AAAACAATGT TGGCCTGGCA CAGTGGCTCA TGCCTGTAAT CTCAACACTT TGGGAAGCCA 001920
001921 AGGGAGGAGG ATCACTTGAG CCCAGGAGTT GGAGACCAGC CTGGATAACA AAGGGAGACC CAGTTTCTAC AAAATATTTA 002000
002001 AAAATTAGCC AGGCATGATG GTGCATGCCT GTGGTCCTAG CTATTCAGGA AACTGAGGTG GGAGGATCAC TTGAGCCTGG 002080
002081 AAGTTCAAGA CAGCAGTGAG CTATGCTCAC ACCACTGCAC TCCATCCTGG GCAACAGAGC TGGACTCTGT CTCAAAAAAC 002160
002161 ATAACACTAA AACATCAAAA TTAAAAAAAA AAAA
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Predicted Small Protein

Name ENST00000424415.1_smProtein_1826:2017
Length 64
Molecular weight 7072.1723
Aromaticity 0.111111111111
Instability index 55.5746031746
Isoelectric point 9.90020751953
Runs 9
Runs residual 0.00210560414642
Runs probability 0.0484013425189
Amino acid sequence MPPNLPYKSYIKNNVGLAQWLMPVISTLWEAKGGGSLEPRSWRPAWITKGDPVSTKYLKI
SQA
Secondary structure LLLLLLLLLEELLLHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLEEELLLLLLLEEEEE
ELL
PRMN -
PiMo -