ENST00000425602.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000425602.1

Source

Gencode19

Same with

lnc-MAGEA8-2:7

Classification

intergenic

Length

1597 nt

Genomic location

chrX+:149115589..149121270

Exon number

3

Exons

149115589..149116393,149116524..149116612,149120568..149121270

Genome context

Sequence
000001 TTACTTGTAA GGGGGCATCT TACAGGCAAG AGGAGTTAGG TGAATGTGAA GAGGAAGGAA CTACTCTGGG CAGGGGGCTG 000080
000081 GGGGACGCTT CGTAGAGGAG GGGGTGTTTG AGCTGGGCCT TGAAGGTCAA AAGGGTTTTG TTAGGTGGGA AATGGGGGAA 000160
000161 GGACAGTCTG AAAGGGTTAG GTACATTCAA GGAGCCCAGA GAAGGTTCGT GGCTGGAGCA GACGCATTCG TAGAGTGAAG 000240
000241 TCATGGGAGA GAAGAGGCTG GGAAACTAGA TTGGTTCCAA CTCCTAAAGG ACCACTGAAG GAGTGTGGGC TGCACGCTGG 000320
000321 GTGCAGCAGG TGAGTTTCCT CACTTGGGTT TCACTGTCAG CATTTTAAAA AGGCAAACTG GTTTTCTTCC TGAGAAGAAT 000400
000401 TCATTGATTC ACTTGTGGCC AGTAAGTCAT CTGGGCCAGA GGTTGGTGGG GAGATGATAG GGGTGCAAGT GTCATCTTCA 000480
000481 ATCACAGCAT AACTGCCCTT GCTTTCTTAC CTCTCGTTTA GATATTTCAA TGCTTGCTCA GGTCCCCTGC GCCCTCCTTC 000560
000561 CTTCTCCCTT CCCAGCCATA CTACTTATGG GATGACTTTC TCTTTGTAAA ATGACCGTTA GTCTTATCAA ATTAATCCCA 000640
000641 AAGTAATACC ATCAATTTCC CCCTAAAATA CCAACAAGAC CCCTGCTTGA AACTGCTTGT ACATTAGAGA CAGAGAAGAG 000720
000721 TCCATGAGAA TCAACATTTT CTGAGGACTC CAACTGTGTG CCAAGAGAGT TCCCCTGCTG GTGCCTCCTC TGTAGTAAAG 000800
000801 GAAAGGCTCC TGGGACCACA TTATCATTCT CTTCACTCGA GAGATGAGGA CACTGAAATT CAGAGAGGGG AAGTGATTTG 000880
000881 CCTCAGCTTG TACTGGTTTC ACTTTGTCAC TCAGGCTGGA GTGCAGTGAT GTGATCATAG CTTTCTGCAG CCTTGACTTC 000960
000961 CGGGCTCAAG TGATCCTCCC ACCTCCGCCT CCTTAGTAGC TAGGACCACA GGCATGCACC AGCACACCCA GCAAATTAAA 001040
001041 AAAAAATTTT TTTTAAAGAT GAGATCTCAC TATGTTGCCC AGGCTGGTCT GAAATTCCTG TCCTCAAGCA ATCCTCCTGC 001120
001121 CTTAGCCTCC CAAAGTGCTG AGATTACAGG CATGAGCTAC CATGCCTGGC CTAAAACATT TTTAATGGAA GTATAATTTG 001200
001201 CAAACAGAAA ACATGCCCAA ATATTAAGTG AATGCACTGA TGAACATTCA CAACTTAACA AGATAGCCAG CACTTAAATC 001280
001281 ACAAAATAGA ACACCGCTAG GACCTCTTTG TAATACCCTC CAAGTCACTA CTTCTGCCCA AAGGTAATCG CTATTTTGCA 001360
001361 ACATTTTTTA TTACTTTATA TAAATGAGAT CGTACACTGC GTAATCTTAT TACTGTCTGG ATTTTTATAT TAAATATTGC 001440
001441 TTGTGAGATT CATCCATGTT GTCATGTCAG CAATACTTTA TTCTCATTGC CATATACTAT TCCATTTTTA TCAGTATACC 001520
001521 ATGATATATT TACCCATTCT GCTATTTGTA CATACTGGAA TTGTTCCCAG GTTTTTGTAA TACAAGCAAA GCTGCTA
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Predicted Small Protein

Name ENST00000425602.1_smProtein_1013:1195
Length 61
Molecular weight 6865.9377
Aromaticity 0.116666666667
Instability index 70.78
Isoelectric point 9.99810791016
Runs 11
Runs residual 0.0335992907801
Runs probability 0.0347754171285
Amino acid sequence MHQHTQQIKKKFFLKMRSHYVAQAGLKFLSSSNPPALASQSAEITGMSYHAWPKTFLMEV
Secondary structure LLLHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLHHHHLHHHHHLLLEEELLLLEEEEEL
PRMN -
PiMo -