ENST00000425991.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000425991.1 |
Source |
Gencode19 |
Same with |
lnc-FPGS-1:2,NONHSAT134852 |
Classification |
antisense |
Length |
521 nt |
Genomic location |
chr9+:130580398..130583710 |
Exon number |
3 |
Exons |
130580398..130580664,130580879..130580990,130583569..130583710 |
Genome context |
|
Sequence |
000001 CCTGGTCTTG AGACCCGGTC TTGGGACGCA GGGCTACCGT GCAGCTGAGG GTGCCGGTTT TGGGTATGGG TACTGTGTAG 000080
000081 AAGTGGAGGA GGAAGCTGAA GCGCGGGTCA CCCTCGGGGC TTGGGGACAG CAGGCTCACA CAGTTGCCCT TGGCCGCCCG 000160 000161 GCCCTGGATG AGTTCCACGG TGCCTCCCTC AGGCCCCAAG TCCAGGTGGC AGCTGTCTAA CTGGAGCAGG AACTCGGAGA 000240 000241 CGGATGGGGA CACTCTGACC TGCATGGGCT GTCTCCCTCC TGACTCTGGG AGTCTCATCT CCTCTGGAGT CATGGTGGGA 000320 000321 AGAAAGGCGG AGAGGAAGTT CCAGGAGCTG GGAGGCCCGA GGGGTGACAG GCATGCCAGG TGTGGTGGCA GACACCCATA 000400 000401 GTCCCAGCTA CTGGGAAGGC TGAGGCACAA GAATCGCTTG AACCTGAGAG GAGGAGGCTG CAGTGAGCCG AGATCACATC 000480 000481 ATTGCACTCC AGCCTTGGTG ACAGAGCGAG ACCTCGTCTC T |
Predicted Small Protein
Name | ENST00000425991.1_smProtein_167:400 |
Length | 78 |
Molecular weight | 8269.1929 |
Aromaticity | 0.038961038961 |
Instability index | 60.761038961 |
Isoelectric point | 9.49176025391 |
Runs | 8 |
Runs residual | 0.0321852060982 |
Runs probability | 0.0342806041336 |
Amino acid sequence | MSSTVPPSGPKSRWQLSNWSRNSETDGDTLTCMGCLPPDSGSLISSGVMVGRKAERKFQE LGGPRGDRHARCGGRHP |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEELLEELLLLLEEEEEEEEEEEEEHHHHHH LLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |