ENST00000425991.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000425991.1

Source

Gencode19

Same with

lnc-FPGS-1:2,NONHSAT134852

Classification

antisense

Length

521 nt

Genomic location

chr9+:130580398..130583710

Exon number

3

Exons

130580398..130580664,130580879..130580990,130583569..130583710

Genome context

Sequence
000001 CCTGGTCTTG AGACCCGGTC TTGGGACGCA GGGCTACCGT GCAGCTGAGG GTGCCGGTTT TGGGTATGGG TACTGTGTAG 000080
000081 AAGTGGAGGA GGAAGCTGAA GCGCGGGTCA CCCTCGGGGC TTGGGGACAG CAGGCTCACA CAGTTGCCCT TGGCCGCCCG 000160
000161 GCCCTGGATG AGTTCCACGG TGCCTCCCTC AGGCCCCAAG TCCAGGTGGC AGCTGTCTAA CTGGAGCAGG AACTCGGAGA 000240
000241 CGGATGGGGA CACTCTGACC TGCATGGGCT GTCTCCCTCC TGACTCTGGG AGTCTCATCT CCTCTGGAGT CATGGTGGGA 000320
000321 AGAAAGGCGG AGAGGAAGTT CCAGGAGCTG GGAGGCCCGA GGGGTGACAG GCATGCCAGG TGTGGTGGCA GACACCCATA 000400
000401 GTCCCAGCTA CTGGGAAGGC TGAGGCACAA GAATCGCTTG AACCTGAGAG GAGGAGGCTG CAGTGAGCCG AGATCACATC 000480
000481 ATTGCACTCC AGCCTTGGTG ACAGAGCGAG ACCTCGTCTC T
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Predicted Small Protein

Name ENST00000425991.1_smProtein_167:400
Length 78
Molecular weight 8269.1929
Aromaticity 0.038961038961
Instability index 60.761038961
Isoelectric point 9.49176025391
Runs 8
Runs residual 0.0321852060982
Runs probability 0.0342806041336
Amino acid sequence MSSTVPPSGPKSRWQLSNWSRNSETDGDTLTCMGCLPPDSGSLISSGVMVGRKAERKFQE
LGGPRGDRHARCGGRHP
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEELLEELLLLLEEEEEEEEEEEEEHHHHHH
LLLLLLLLLLLLLLLLL
PRMN -
PiMo -