ENST00000426301.2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000426301.2

Source

Gencode19

Same with

,

Classification

intergenic

Length

1322 nt

Genomic location

chr1-:144275918..144284857

Exon number

5

Exons

144275918..144276523,144277303..144277410,144279587..144279906,144280578..144280629,144284622..144284857

Genome context

Sequence
000001 GATACATGAT CCCTTAATTC AGGCTCAGGC TGAAGAACTG ACCCACTTAC AACAGAAGAT ACAGGAAGGG AGAGGTGTCT 000080
000081 GCTACCTTTT CACCCAGCAT GTGAAGAACA CAGTCAAGTC TTTTGAGGGC CTTCTCAGGA ACACTGACAT TGCCTACTAC 000160
000161 CAGAGACAGA GATTCTGTGA GCAAATGGTA CAAGGAAGCC AGCTGACAGA GATCCTTGTC AGAAAACTTG CCACAGAAAA 000240
000241 TCACAATGGT AAGAAAAATG AAGACAGGCA AAAGCCACTG GCTCCCAGGC ACACTTTACT CCCAGTCAAA AGTGGACTGT 000320
000321 ATACTTCCTC TTTGATGTGA TGGTCCCTTT GGTTTTGGTG CCTCTTCCAT GAGCTTCAGA TCAGAACTAG CTATGTGGTT 000400
000401 CCAGGCTGCC TTGGTTTAAT CCCTTGTCTT GCCTACTTCA CCTGGCTCAA GAGGGAAGTC CAGGAGGAAG AAATGGATGA 000480
000481 AGTCCTGGAG TACTCACTAG ATGAACAGTA TTTGACTCAT TCCAGCTGCC ATGACTCCCA CCAGCTTCCC AGCAGCAATG 000560
000561 CCTTCCTCTT TGATGCACAG GAAGGCCCCT CGGCTGTGGA AACAGCCAAA GATGAGATCC AGAGCCAGTG GCAGCACCTG 000640
000641 AAGGAGACCC TTTTCATCAA CAACTGCCTG TGAGAAAAGC TAGAACGTCA TCACAGCAGC TTTGATGAAG AAAATGGATG 000720
000721 CACCTCTAAC CTCTACAGGC AAATCATAGA TTCCATTGTC CAGCTGTATA ATGAAAACAG AGTTCTCAGA GAAGAATACC 000800
000801 GGAGACTCTC CCGACTTGCC TGAATCAAAT TTCCAGAGGT AAGTGGTGAA AGGCCACAAT ATGAAGTCAC TCTCAGATGG 000880
000881 GTCCCTTCTC TTGCCACACT CCACTGTAGA AATAAAAGAG GACGGGGAGG CCAGAGCTGC TCAAAACCTT ATAACCCACA 000960
000961 ATTCTCATAG CTATTCTCAA CTTAGAGAGG GCTGCTTTCT AGACACACCC CCTCCAGGCC CCCAGACTGC CAGGCTCCAG 001040
001041 GAATAAGTAG CTCTAAGAAA TACAGTATTT CGGTGCGAGC CACACCCCAC TCTTGCAAAT TGGAGAAGAG AAGGACAAAC 001120
001121 TTAAAAGGTG AAAAGATTTA ACAGAACAAC AGGGTGAAAC CCCATCTCTA ATAAAAATAC AAAACTTAGC TGGGCGTGGT 001200
001201 GGCATGCACC TGTAGTCCCA GCTACTCAGG AGGCTGAGGC AGGAGAATCA TTTCAACCCA GGAGGCAGAC GTTGCAGCGA 001280
001281 GCCAAATTTG CGCCACTGCA TTCTAGCCTG AGTGACAGAG CA
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Predicted Small Protein

Name ENST00000426301.2_smProtein_860:1045
Length 62
Molecular weight 6673.3315
Aromaticity 0.0327868852459
Instability index 42.3868852459
Isoelectric point 5.45867919922
Runs 11
Runs residual 0.0275108347466
Runs probability 0.038067479244
Amino acid sequence MKSLSDGSLLLPHSTVEIKEDGEARAAQNLITHNSHSYSQLREGCFLDTPPPGPQTARLQ
E
Secondary structure LLLLLLLEEELLLLLEEEELLHHHHHHHHHHHHLLLLHHHHLLLEEELLLLLLLLLLLLL
L
PRMN -
PiMo -