ENST00000427327.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000427327.1

Source

Gencode19

Same with

lnc-CNTNAP3-2:1,NONHSAT131215

Classification

intergenic

Length

476 nt

Genomic location

chr9-:39384503..39405302

Exon number

3

Exons

39384503..39384603,39385409..39385515,39405035..39405302

Genome context

Sequence
000001 GACAATATCT TGAACATTAA TGCCTTTAAG AGAAATGCCC TTAAAAATAC CTTTAGCAAG CATTTCCTTA GCAAACACGC 000080
000081 TCCTAGCAAC AGAGAGTAAG TTTTGTAAGG GCATGTGAAT ACGAAGGCAG AGACTGGAGT GATGCCAAGA AATGTGAAAG 000160
000161 ATTTCCAGGA GCCATCAGAA GCAAGGAAAA ACGCATGGAA AAGATTCCGA GTGCTCAGAA GGAAGCAACC CTACCACCAC 000240
000241 CTGATTTGGA CTTCTAAGCT CCAGAACTAA GCGAAGAGGA CGTAAATATT CCCATTTAGA AGCCCAAAGT CAGTGAGATG 000320
000321 AAACCCAACA TCAAGAAATT GAAGCAAAGT TACTTGTGGA TAAACAAAGC ATTAGATATT CCCCTGAAGA AATTTGGAAA 000400
000401 GAAATTGAAA TTGCCTGTGG TTGTAGCCAG TTCACCTGTA AAGAATATAA AATTCTCCCC ATGAACTGGT CATCCC
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Predicted Small Protein

Name ENST00000427327.1_smProtein_317:463
Length 49
Molecular weight 5477.7263
Aromaticity 0.0833333333333
Instability index 67.7145833333
Isoelectric point 10.5228881836
Runs 9
Runs residual 0.0219298245614
Runs probability 0.0167127912226
Amino acid sequence MKPNIKKLKQSYLWINKALDIPLKKFGKKLKLPVVVASSPVKNIKFSP
Secondary structure LLLHHHHHHHHHHHHHHHHLLLHHHLLLLLLLLEEEELLLLLLEEELL
PRMN -
PiMo -