ENST00000428191.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000428191.1

Source

Gencode19

Same with

lnc-SF3B1-1:1

Classification

intronic(S)

Length

1069 nt

Genomic location

chr2-:198115582..198167243

Exon number

6

Exons

198115582..198115716,198161029..198161123,198161250..198161296,198164206..198164259,198165687..198166137,198166957..198167243

Genome context

Sequence
000001 GTTTGGGAAA GAGAATATTG GAATTCATAT TTCTTTAAAT CATTCTTTTA AACTTTTAAT TTTTATGTAG TTTTAGTACA 000080
000081 TCTTATTTGC TAGTACTGTG TCATCTTTTT GGCTGTATTT TTCACTGGCT GCCACCTGGC CAAATCACCA CTTGGGTTAT 000160
000161 AACAGCAGCC TCTGACTGGT CTCCTTCCGT CTGACCTTGG CCCCTGCACT CTACTCTCAA CGTAGCTCTC AGAGTGATGG 000240
000241 AACTCAGAAC TTGTCACTCC TGCTCAAAAA CTTCCAGTTT CACCCAGGGG AAGTATCAAG GTGACATGAG GGGACAGGAA 000320
000321 ATATTGTCCC TAAATGTTCT AAGAGTGGAT CTCCCATGTA TTCAAGCAAT CGAGGGGTGT TTAATGAGCT CCATCTACAT 000400
000401 AGCAATGATA CAGCATAGCT CTGCTGGGGC TCTCTGCTCT CCCCTTCTCC ACAAAAGGGA AGGACAGGTA AGAACAGGCA 000480
000481 CAATAAAATA GAAACCAGAC AGAAAGAATT GGGAACAAGG AGACAAGACA AGAATCATGC TTTACGTGAT TTAATCCTAA 000560
000561 TATTTTTATG AGAGGATGGC TATCATCATT TCATTTTAAA GATGAGGAAA ATGAAGCCGG GTGCGGTGGC TCATGCCTGT 000640
000641 AATCCCAGCA CTTTGGAAGG CCGAGGAAGA TGGCTCACCT GAGGTCAGGA GTTCGAGACC AGCCTGGCCA GAGAGATGGC 000720
000721 CAGAGATGGC TAGAGATGGT TGCTGCAAAT GCCATTATTT CATTCCTTTT TATGGCTGAG TAGTATTCCA TGAGGGAAGG 000800
000801 AATTAGGAGC GGGAAGGAGA TTGACTGTTA GTTTCTTAGG ATTGGACTAA CAAAAGTGGA GGTTGTTACT TACACTGCAA 000880
000881 AAGAAACAAC CAGAGCTGTG TCACTCAGAA GGCTGAAAAG AATCAGGCTG ACAGCATAAT GCAGTGAAGA TGGGTGAAGA 000960
000961 GAGATGTGTT TCATCTGAAA TTTGAAGGGC TTTACAACTC TTCTCCTTTA ACTAACTTAC CATCCTTTAA CTAACTTACC 001040
001041 ACCCAAAATG AATTCTGTAG CCTTTGTCA
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Predicted Small Protein

Name ENST00000428191.1_smProtein_236:490
Length 85
Molecular weight 9228.6864
Aromaticity 0.0357142857143
Instability index 51.5202380952
Isoelectric point 8.72052001953
Runs 15
Runs residual 0.0445859872611
Runs probability 0.0260731319555
Amino acid sequence MELRTCHSCSKTSSFTQGKYQGDMRGQEILSLNVLRVDLPCIQAIEGCLMSSIYIAMIQH
SSAGALCSPLLHKREGQVRTGTIK
Secondary structure LEEEEELLLLLLLLLLLLLEELLLLLLEEEEELEEELLLLHHHHHHHHHHHHHHHHHHHH
LLLLLLLLLLLLLLLLLEEELEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHH
LLLLLLLLLLLLLLLLLLLLLLLL
PiMo ooooooooooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTT
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