ENST00000431090.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000431090.1

Source

Gencode19

Same with

lnc-MRPL40-1:1,NONHSAT083405

Classification

antisense

Length

2097 nt

Genomic location

chr22+:19435416..19437628

Exon number

2

Exons

19435416..19435848,19435965..19437628

Genome context

Sequence
000001 CCGGGGTCGC AGGGTAAATC CGGGGCGAGA CCTGGCGCGA AGCCTACGCG ACCACCGCGA CGACAGCGCC ATTCACCCCG 000080
000081 GGCCAGGCGG GCATCCTGGG CCGCGCAGCT ACCTTACGTC AGCCGCCTCT CAAATCACAC GGCTCTGGCC AGTTCTTTTC 000160
000161 AGCAGCTTTA TGAGATTTTC TCAAATCTCA ACAATCCGGT ATATTTTCAA AAGTACATAC TGAGCATCAA GGTGGTGCAG 000240
000241 CGAACCTCCC AGATCTGCAG CTCCAGCAGT CTTGCTTGAG CGTCCACTCA GGATGGAGGT GAACTCGCAA AGTAACTGAG 000320
000321 ATTGGTTGGG CATGACATAT GGTGGATCTA GGGTTGAATG ACCTCCCCAG GGAACGCAGG CTTGAAGTGG AGGCTGAGAA 000400
000401 TGCAATCCGA GTACAGCCAT AGGCCGGTCA AAGGGTCTTG CTGTGTCACC CAGGCTTAGT GCAGTGGCGT GGCGTGTTCA 000480
000481 TGGCTTACTG CAACCTCAAA CTCCTGGACT CCGAACAGCT GGGACCAAAA GCATGCACAG CCTCACCAGG CTAATTTTTA 000560
000561 ATTTTTTTTT TTTTTTTTTG TAAAGATGGG GTCTTGCTAA GTTACCCAGG CTAGTTTGGC CTCAAGCGAC CCTCTCACTT 000640
000641 TGGCCTCCCA AAGTGCTAGG ATTATAGGCG GAGCGCCAGT GCCTGGCTGG GACGTTTATA AAAAGGAGCA ATGCACAAGA 000720
000721 GGCAACAAAG GCAAGTAAAG AGGAGGCTGG TGGGCTTGCA GAAACGCCCT GCAGTACCTA TGCTGCGGTT CTCCCACTTC 000800
000801 ACTGATAACA AATCCTCAGT ATCCACTGAT ACAAATCCTG GGACTGCTGG GCCAGTCCCA GGAATGACAC TGGGACAGAC 000880
000881 TCCCTGGAGG TGGATCAGAA AGCTGCAGTT TTACCAGGGG TCCTGCTGTT GAGGCAGCCG GCTCAAGGAC CAAGCCCAAA 000960
000961 TAAGACACTG AGAGGAAGGC TGCAGGCCAG GGTGCAGGAG TAATGACCAG GATCAGTGCT CCAACTGGCC CCACTGTGTC 001040
001041 ATTAAAAGGC TCTGCAATGG AATCCATCCT GGTCCAGGCA GGGGAGTGTG CCTCCAGCAA AGGACCAGGC GTTTCACTGC 001120
001121 ATACACAGCA GGTGTTGCTT AGTGAAGACA AAAACCCAGA GCCAGAGGTA CTGTAACATT CTTCATTATG CATAAAGTGA 001200
001201 CAGTCTGTTA GCTGATGTGA TCCTGCAAAT GAAGGCTGTC TACCCACCAA GGGTTTCTCC CTCTGCTAGT AAAACTGAGA 001280
001281 CTTTGTCAGT GGAGGCTCAG GTAAGTCCCC ACAGTGCTCA TGCCTTCCAA AACCACGCCC ATTTCCAGTG ATGATGGTTT 001360
001361 GTGCCACAGG CCAAGTACTG AACATCATGA CACTCATAGA CACTCTTCAC TGAAGACGTG GATAGACCCT GGGGCCACCA 001440
001441 TTCTCTCCTC TCTGGAGTGT TGGAGGGGCC CTGACCAGGG CAGGACCCCC ATGTCTGGAA GCAGGGTTAG CCCTGGCTCA 001520
001521 TGGGGGACCC TGCTGGGCTT AGCCATTGCC ACCTAGGGAT CAGGCAGCCT TGTTTCTTCC TACTTTCTCC AGGAGAAGCC 001600
001601 CCAGAGGGAC ACTTTTCTAA TGGTGAGATG GAACACGGAG CACCTGCCAA CAGGCCTTCA GTTATGGTCA GAGGCCCAAC 001680
001681 CACCAGTCTG TGTTAGTACC TAATCAAACA TTTAGATTTA GGCTTTAGTT ATTGCCTGTT TTTACTTGAA ATTCTTGGCT 001760
001761 TAGAATTATT CCCAATGGGG CCAGGCACAG TGGCTCATGG GAACAAATTT AAAATAATCA GATTAGCATG TCAAAAGATC 001840
001841 TCACGTTATA GAAAGTGAAG ATCTAAGACC AAATAAATAC TGATAAAAAA TACAGGCCAG CAGAAGCTTG GATGATTTAA 001920
001921 TAAATTAAAA TTGGGAGTTG GGGAGTAGGG AAGAAGGAGA GGAACATCTC TTTAGCATTT GTTCATTCTA ACATTCACAT 002000
002001 GTTTGCTTCT CCATGGAGTT GTTTCACTAT GAACAGGTTC ACTAAGGAGC CAGTTATGTC CATATGAAAT GAGAATAAAA 002080
002081 GTGCAAACTC ATTCAGA
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Predicted Small Protein

Name ENST00000431090.1_smProtein_1319:1555
Length 79
Molecular weight 8378.2644
Aromaticity 0.0384615384615
Instability index 51.8756410256
Isoelectric point 6.95367431641
Runs 10
Runs residual 0.00547217010632
Runs probability 0.03112524289
Amino acid sequence MPSKTTPISSDDGLCHRPSTEHHDTHRHSSLKTWIDPGATILSSLECWRGPDQGRTPMSG
SRVSPGSWGTLLGLAIAT
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEELLLLEEEEELLEELLLLLLLLLLLL
LLLLLLLHHHHHHHEELL
PRMN -
PiMo -