ENST00000431095.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000431095.1

Source

Gencode19

Same with

lnc-C11orf89-2:5,NONHSAT017471

Classification

intergenic

Length

1481 nt

Genomic location

chr11-:2016467..2019045

Exon number

6

Exons

2016467..2017024,2017106..2017228,2017309..2017421,2017517..2017651,2017748..2018180,2018927..2019045

Genome context

Sequence
000001 GGGGGTAACG GGGGAAACTG GGGAAGTGGG GAACCGAGGG GCAACCAGGG GAAGATGGGG TGCTGGAGGA GAGCTTGTGG 000080
000081 GAGCCAAGGA GCACCTTGGA CATCTGGAGT CTGGCAGGAT TGCAGCAGGA CGTCACCAGG AGGGCGAAGC GGCCACGGGA 000160
000161 GGGGGGCCCC GGGACATTGC GCAGCAAGGA GGCTGCAGGG GCTCGGCCTG CGGGCGCCGG TCCCACGAGG CACTGCGGCC 000240
000241 CAGGGTCTGG TGCGGAGAGG GCCCACAGTG GACTTGGTGA CGCTGTATGC CCTCACCGCT CAGCCCCTGG GGCTGGCTTG 000320
000321 GCAGACAGTA CAGCATCCAG GGGAGTCAAG GGCATGGGGC GAGACCAGAC TAGGCGAGGC GGGCGGGGCG GAGTGAATGA 000400
000401 GCTCTCAGGA GGGAGGATGG TGCAGGCAGG GGTGAGGAGC GCAGCGGGCG GCGAGCGGGA GGCACTGGCC TCCAGAGCCC 000480
000481 GTGGCCAAGG CGGGCCTCGC GGGCGGCGAC GGAGCCGGGA TCGGTGCCTC AGCGTTCGGG CTGGAGACGA GGCCAGGTCT 000560
000561 CCAGCTGGGG TGGACGTGCC CACCAGCTGC CGAAGGCCAA GACGCCAGGT CCGGTGGACG TGACAAGCAG GACATGACAT 000640
000641 GGTCCGGTGT GACGGCGAGG ACAGAGGAGG CGCGTCCGGC CTTCCTGAAC ACCTTAGGCT GGTGGGGCTG CGGCAAGAAG 000720
000721 CGGGTCTGTT TCTTTACTTC CTCCACGGAG TCGGCACACT ATGGCTGCCC TCTGGGCTCC CAGAACCCAC AACATGAAAG 000800
000801 AAATGGTGCT ACCCAGCTCA AGCCTGGGCC TTTGAATCCG GACACAAAAC CCTCTAGCTT GGAAATGAAT ATGCTGCACT 000880
000881 TTACAACCAC TGCACTACCT GACTCAGGAA TCGGCTCTGG AAGGTGAAGC TAGAGGAACC AGACCTCATC AGCCCAACAT 000960
000961 CAAAGACACC ATCGGAACAG CAGCGCCCGC AGCACCCACC CCGCACCGGC GACTCCATCT TCATGGCCAC CCCCTGCGGC 001040
001041 GGACGGTTGA CCACCAGCCA CCACATCATC CCAGAGCTGA GCTCCTCCAG CGGGATGACG CCGTCCCCAC CACCTCCCTC 001120
001121 TTCTTCTTTT TCATCCTTCT GTCTCTTTGT TTCTGAGCTT TCCTGTCTTT CCTTTTTTCT GAGAGATTCA AAGCCTCCAC 001200
001201 GACTCTGTTT CCCCCGTCCC TTCTGAATTT AATTTGCACT AAGTCATTTG CACTGGTTGG AGTTGTGGAG ACGGCCTTGA 001280
001281 GTCTCAGTAC GAGTGTGCGT GAGTGTGAGC CACCTTGGCA AGTGCCTGTG CAGGGCCCGG CCGCCCTCCA TCTGGGCCGG 001360
001361 GTGACTGGGC GCCGGCTGTG TGCCCGAGGC CTCACCCTGC CCTCGCCTAG TCTGGAAGCT CCGACCGACA TCACGGAGCA 001440
001441 GCCTTCAAGC ATTCCATTAC GCCCCATCTC GCTCTGTGCC C
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Predicted Small Protein

Name ENST00000431095.1_smProtein_353:622
Length 90
Molecular weight 9599.6387
Aromaticity 0.0112359550562
Instability index 82.5662921348
Isoelectric point 12.0001831055
Runs 11
Runs residual 0.0196078431373
Runs probability 0.0452939570587
Amino acid sequence MGRDQTRRGGRGGVNELSGGRMVQAGVRSAAGGEREALASRARGQGGPRGRRRSRDRCLS
VRAGDEARSPAGVDVPTSCRRPRRQVRWT
Secondary structure LLLLLLLLLLLLLEEELLLLEEEEEEEEELLLLHHHHHHHHHHLLLLLLLLLLLLLLEEE
EELLLLLLLLLLLLLLLLLLLLLLEEEEL
PRMN -
PiMo -