ENST00000433939.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000433939.1 |
Source |
Gencode19 |
Same with |
lnc-TRIM63-1:2,NONHSAT001781 |
Classification |
antisense |
Length |
721 nt |
Genomic location |
chr1-:26496671..26498229 |
Exon number |
3 |
Exons |
26496671..26497089,26497647..26497826,26498108..26498229 |
Genome context |
|
Sequence |
000001 CTTGGTGTCA TGAAGACCAC TGGTCTTCAC GTCCGCTCCC ACCCTACAGG CCGCCAGGGA GACCAGTGCC GCCCACCATG 000080
000081 CGATTTCGAC GCTTGACCCC TGGTTACTTC CGGGTGTTAC AGATGCAGGT AGCTGGTGAG CTGAAGGCAG AGCCCCGGAG 000160 000161 TCTGCTGGCA GGAGTTGTGG CTACAGTGCT AGCTGTCCTC GGCCTGGGTG GCTCCTGCTA TGCCGTCTGG AAGATGGTGG 000240 000241 GGCAGCGGCG GGTGCCACGG GCCCCGTAAC GAAGAAGAGA GACTCTCACT TGGATGCTGG GGGGCTCGAC GCTCAGCTGC 000320 000321 TTCAGCCTGG GAGAAAGAAA AACAGGAGTT GGGAGCTGAC CAGGTGAGAG CCCTATCTGC TGAGCACCCA TCCATCAATC 000400 000401 CTCTCCTTAC TCCTTCATAC CTTTTCTTGT GGTCTTTGGA TCGGAAGTGG GTCTTCAGGT TGGTGGAATC GATGAAGTAC 000480 000481 CTCCTGTAGG AATGGAAGTG AGAAGGAGAG TGAGGAGGTG ATAGTCTCCC AAGTGCACCT ATCTCCCTAG CCCTAGCTTG 000560 000561 TCCCTGACGC CAGGATCCGG GTCTGAGAAA CGGGAGGCGG GCGGACCCAC GGGTCCCAAG AGAGAAGACT CTGCGCTGCC 000640 000641 TGGGGCTTCA ACTTCACATC TCCCGGCCGG TACCGCGGAC CCTCCTCCGC CCCAGGCCGG GCTCGTCCGG GACTCACGCG 000720 000721 C |
Predicted Small Protein
Name | ENST00000433939.1_smProtein_77:268 |
Length | 64 |
Molecular weight | 6929.2633 |
Aromaticity | 0.0793650793651 |
Instability index | 54.1888888889 |
Isoelectric point | 11.5545043945 |
Runs | 14 |
Runs residual | 0.0772594752187 |
Runs probability | 0.0592336033513 |
Amino acid sequence | MRFRRLTPGYFRVLQMQVAGELKAEPRSLLAGVVATVLAVLGLGGSCYAVWKMVGQRRVP RAP |
Secondary structure | LLEEELLLLLEEEEEHHHHHHLLLLLLHHHHLHHHHHHHHHLLLLHHHHHHHHHLEEELL LLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL LLL |
PiMo | ooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiii iii |