ENST00000434437.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000434437.1 |
Source |
Gencode19 |
Same with |
lnc-TNFAIP3-2:1,NONHSAT115195 |
Classification |
intergenic |
Length |
535 nt |
Genomic location |
chr6+:138266503..138272711 |
Exon number |
2 |
Exons |
138266503..138266603,138272278..138272711 |
Genome context |
|
Sequence |
000001 TGGAGATGCA CTGACCTTCC TTGCAAGAGC CTTTCCCTGA AGTTGGGCTC CTGAGAGAAG TTCTGAACAT GGCTATCCCT 000080
000081 GCCTTTTCAT CTTGTCAGCA GATTTCTTCA GCAGCTGCTC TACAAATATG CAATGGACCC TTTAAGCATT TCTCCTTTAC 000160 000161 AGTGAGCACA ATGCTAAGCT TTGTCAGCAG ATGCCACTGG AGCAGCATTG CAGAAGAAAG CGAGTTTCTC TTCCTGATTT 000240 000241 TGGTGTGCTA CTTTTCTTCT TCTTGCTCCA GCTGCATTAT CCATCAGTGG TACTATGTAT AAGACCATCC CGCTGTGCCC 000320 000321 TGCCCTACCA CCTGCCCAGA GGCACATCCC TCACTGACTA TTTGGCCTGA TTCTGAGCCT GTGGCCACCT TCTCACAGCC 000400 000401 CTGCAACACA GGCACTGTGT GCTCCAGGCC TCACGTCCCC AGCAGTGGCC TGACTGTGCA CTTAGCCACA GCCTCAGTTT 000480 000481 GCCTGTGCTC CAAGAAATTG CATCCTATTT GCCCAGCAGC TATGGACCAG CTCCT |
Predicted Small Protein
Name | ENST00000434437.1_smProtein_68:301 |
Length | 78 |
Molecular weight | 8675.9407 |
Aromaticity | 0.168831168831 |
Instability index | 65.6194805195 |
Isoelectric point | 6.21759033203 |
Runs | 9 |
Runs residual | 0.0191981931112 |
Runs probability | 0.0616989538559 |
Amino acid sequence | MAIPAFSSCQQISSAAALQICNGPFKHFSFTVSTMLSFVSRCHWSSIAEESEFLFLILVC YFSSSCSSCIIHQWYYV |
Secondary structure | LLLLLLLLHHHHHHHHHHHHHLLLLLLEEEEEHHHHHHHHHHHHHHHHHHHHHHHEEEEE EEELLLLLEEEEEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLHHHHHHHHH HHHHHHHHHLLLLLLLL |
PiMo | oooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiTTTTTTTTT TTTTTTTTToooooooo |