ENST00000435301.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000435301.2 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
733 nt |
Genomic location |
chr20-:48780001..48782639 |
Exon number |
2 |
Exons |
48780001..48780660,48782567..48782639 |
Genome context |
|
Sequence |
000001 AAAGAAGCGG AGGGAAGCAA CACAGCGCAG CGTGACTACG TGCTTGATCT GTCTCCTCCT AACGGGCATG CAGGCAACCC 000080
000081 AGGTGCCTTA GGTAAGTGAC CCCATTCCCT GCCCTGCCTT GGAGGGCCGG ATGAGTCAAA GAGTAATCTT ATCCCTCTGC 000160 000161 TAGTGAGTAC AAATGAAGTC TGTGGGCCAA CAAGGAGCGA GGAGCAGTTT CCTGGAAGCC CTGGGCTGGT GTTTGACTTG 000240 000241 CTTTGAGATA GAATAAATGG GAGAAAGAGA CTTTATGGGA CATCTGGGCC TAGGGCTCCT GGATGCTGTG CTGAAAACAC 000320 000321 CACGTACAGA AGCCAGTCTA ACCTTCTGGA TGATGAGAGC CCAGATGCAG TACAGAGGTG CCCCAGCCAA CAATCAGCTG 000400 000401 CTATCTGAAT CCCATCTGGA TCCCATCTGA ATCCCATGTC ACCATGAATG AGGCCACCTT AGCCCAGCCA GCACAGCTGA 000480 000481 AAGCCAGAAG CAGCCGCATG CACAAGCCCA GGGGAAGCCC ACAGAGGAAC CACCAGCCAA CACACAGAAT TGCAAGCAGT 000560 000561 TAAGCAACTA AGATTAAGAC AACAATTTTA AAATGAACCA GGTCCGGCCG GGTGCGGTGG CTCTCAGGCC TGTAATCCCA 000640 000641 GCACTTTGGG AGGCCGAAGC GAGCGGGTCA CCGGAGGTTG GGAGTTCGAG ACCAGCCTGA CCAACATGGA GAAACCCCGT 000720 000721 CTCTACTAAA AAT |
Predicted Small Protein
Name | ENST00000435301.2_smProtein_443:562 |
Length | 40 |
Molecular weight | 4376.903 |
Aromaticity | 0.0 |
Instability index | 82.5487179487 |
Isoelectric point | 12.180847168 |
Runs | 7 |
Runs residual | 0.0107466063348 |
Runs probability | 0.0272667625608 |
Amino acid sequence | MNEATLAQPAQLKARSSRMHKPRGSPQRNHQPTHRIASS |
Secondary structure | LLHHHHLLHHHHHHHHHLLLLLLLLLLLLLLLLLLELLL |
PRMN | - |
PiMo | - |