ENST00000436238.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000436238.1 |
Source |
Gencode19 |
Same with |
lnc-CRYBA4-1:9,NONHSAT084512 |
Classification |
intergenic |
Length |
847 nt |
Genomic location |
chr22+:27053220..27062159 |
Exon number |
3 |
Exons |
27053220..27053318,27059280..27059362,27061495..27062159 |
Genome context |
|
Sequence |
000001 GCGCACCGGC CAGCTAGCCC CTTTGTGCGG CGGGGGCTGC GGAGTGCTCC CTCCAAGACC GGTTGCACCC CGCTTTCCTG 000080
000081 GCCAGGACTC TGGGCGCGGT TGGAGGCATC TGTCCACCCA TGTGGTTCCA GACACGTTCA TGTGGCCACC ATGACCCCGT 000160 000161 CGGCATCACA GGGGTAACCA AGAGAGCAGC AAGTTCCTGG GACAGAGGAG ACAGAAGGGA ATTTCCAGGT TCTTCAGGAC 000240 000241 GTTCACAACC ACACTGAGAA GCATCTTTGC AGATAAGTAT TTAAACTTAC CAGCCCATAG CCTACCAGCC TGCCCTCTTC 000320 000321 TGGTCTGTGC AGGAAAGTGT AGTATCCTAG AATGCCAAAG TGGGAGGGGA AATGGGTGAT GTAGCTCATT CTCTTTTCTA 000400 000401 CCTCTATGGA AGAAAGAAAG AGCCTGTCCC CATTTTGTGG GGTCCCAGAA AGGGTGATTT TCACACTTCA CATTTGGCGT 000480 000481 TAGGGCTAGT ATTTCACAAA CATTACCGTC TGGAACTTTT GAAGGCTGAG TTAAATGACT TCATCTTGTG TACTTGTAGA 000560 000561 ACTGCTATTA GAAGGAGGCT GGGGACTCCC TGATGATGTG AACCAGCCCT TCTCTTCTCA GTTTCAGCAC TTTGTGATCA 000640 000641 TATTTATAAA CCTTGGACAG GGCTCCTTGG CCTTAGAGTT AAGTGAAGAG TTAACACTGT GACTTTAGAT GCATTTTTCT 000720 000721 CAGTGTAAGT GTCTGAGCTC ATCTCCAGTT CTGGACTCGT GCCCCCACTC CCGGGTGCTG ACAGCAAGCT CTGAAGATAT 000800 000801 GCTGAGAGAG CTCCCTGACT CTCCTGACTC AGGTCTGCCA GTTGATG |
Predicted Small Protein
Name | ENST00000436238.1_smProtein_371:592 |
Length | 74 |
Molecular weight | 8474.8939 |
Aromaticity | 0.109589041096 |
Instability index | 46.5028767123 |
Isoelectric point | 9.82720947266 |
Runs | 9 |
Runs residual | 0.0208572691118 |
Runs probability | 0.0355649767414 |
Amino acid sequence | MGDVAHSLFYLYGRKKEPVPILWGPRKGDFHTSHLALGLVFHKHYRLELLKAELNDFILC TCRTAIRRRLGTP |
Secondary structure | LLHHHHHHHHHHLLLLLLLLEELLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLLHHHH HHHHHHHHHHLLL |
PRMN | - |
PiMo | - |