ENST00000437374.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000437374.1 |
Source |
Gencode19 |
Same with |
lnc-GTPBP4-1:2 |
Classification |
intergenic |
Length |
893 nt |
Genomic location |
chr10+:1068606..1090138 |
Exon number |
3 |
Exons |
1068606..1068723,1082729..1082833,1089469..1090138 |
Genome context |
|
Sequence |
000001 TGGTTGAACG GACTCACCAG GAAACGTGAC TTTCGTGTCC GACCTCTGCT GTATCAGGAT TCGATTCTTG GTGTTAAACA 000080
000081 AGACAACGCT GAAGGCTCGG TGCAGCAGCC CTGCAAAGGA GTGGAGCCCC AACCCACGCA GGGCGTGTCT TCATGGCTTT 000160 000161 TCCTGGCCAA TCTGATACCA AGATGCAGTG GCCAGAAGTA CCTGCACTTC CACTCCTGTC AAGTCTCTGC ATGGCTATGG 000240 000241 TGAGGAAGAG CTCTGCACTG GGCAAGGAAG TTGGCCGTCG AGTGAAGGAA ATGGTGATGC TGGTGGCCCC TTTCCGGCAG 000320 000321 TCAAGTTCCC TATCAAGGAC ATTCAGTTCT CGGAAAGTGG TGAAGGCACA TGCTTCCCTG CATGGTGCCC GCCTCTCTCC 000400 000401 ACTCTCTAGA AATATTAGAG GCTAGGCTGC TGCTGTATGT CAGGGCTAGT CCCTCTTCTA TGAATCCAGA ATAACTCTGA 000480 000481 AGAAGCCGAG TAACAGGCAT GAAGTGAAGA GAAATCGCTG TAACAGGAAG ACAGCAAAGC AGATGCTAAT GACCACACTA 000560 000561 TTTAACGAAC TGGAACCAAC GAGAAAATAC GGTATTACTG AAGACTGCAC TTCCTTGAAC AGAGTGCTCT TCTCAGCAAA 000640 000641 TCGGAAATGC CTACACAAAT CGCTTTACAA GAAAGACTGT TTCAAAGCAG CACCTTTCTC AATGTTCTCG TTCAGGTGAC 000720 000721 AATTCTTCTT GGTCTCAGCT CCAATTTTAT TGTCATTTTC ATCAATAAGG ATACACATCT CTGCCAGGAG TTGAACCTGT 000800 000801 TGCTTGTCGA GGTGGTTAGT GTTTATTTCA GGCATCATTA CAAAATGTCT GATCTGTTCT AGAACACTAA TATTAAAGGA 000880 000881 AAAGAGAAAG AAA |
Predicted Small Protein
Name | ENST00000437374.1_smProtein_152:424 |
Length | 91 |
Molecular weight | 9881.6113 |
Aromaticity | 0.0444444444444 |
Instability index | 72.5822222222 |
Isoelectric point | 11.7233276367 |
Runs | 10 |
Runs residual | 0.0287477954145 |
Runs probability | 0.0325119236884 |
Amino acid sequence | MAFPGQSDTKMQWPEVPALPLLSSLCMAMVRKSSALGKEVGRRVKEMVMLVAPFRQSSSL SRTFSSRKVVKAHASLHGARLSPLSRNIRG |
Secondary structure | LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHLLHHHHHHHHHHHEEELLLLLLLLL LEEELHHHHHHHHHHHHLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |