ENST00000437897.3
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000437897.3 |
Source |
Gencode19 |
Same with |
NONHSAT076735 |
Classification |
antisense |
Length |
1132 nt |
Genomic location |
chr2+:215886722..215906980 |
Exon number |
6 |
Exons |
215886722..215887447,215887616..215887744,215894877..215894973,215900494..215900557,215903667..215903765,215906964..215906980 |
Genome context |
|
Sequence |
000001 ACTCTAGTCT TTCTTTTGAT TTTCCAGCTA CTAGATATGA TTAAACCTGT AATAAATGGA GTGAAGCCTC TATATTACAT 000080
000081 TCTCCAGGGA GTTTTTTGTG GTAATTTATT AAATAAAAAG ATAAATTCTG TTGGGCTAAT ATATTTGTTT TAATTGAGCT 000160 000161 TTGAGGGTGT TGTACATTTG AATGACTTTT ACCCAGTAGA TACTGAAATA TGTTTTTTAA TTATAAGTTT GGTGTACATA 000240 000241 TGTGGGAAAC CAGCAAAGTT CCATATAGTA TAGTCTTGGC TTAGTGAGAT AAAAGTTATA GAAGAGGACA TTGGAAATCT 000320 000321 AGCCACACTG TGGCTAATAG GCTTGGTTCT CTGAAATAAA AGTATAATTC AGGGCCAATA ATGTGGAAGG CATTGAGAAG 000400 000401 CATATCCACC AAGGAGCAAC ATTATGGTCA TTTTGTCTTT GTTATTACTT ACTGCTTTAT TCTGAGAACA ATACAGGCAT 000480 000481 TAAAGTTCTA GAAGCTTCAC AGATCATTAA TCATCAACAT AAATTCAGTG AATTAGAATT CTTTCTTCAA AAGTATGTGT 000560 000561 CAACTTCAGA TTGCAGATTT GCCAAAGCTT CATGTAGAGC CCTTCTCTCT TTTATCACGA GTAAAAGTTC AGGTTTAAAA 000640 000641 TAGAACAACG GATGACTAAT GCCATTTCCA GCTGTGACTG AATTCTCCAC TGCCTGATGC TTTTCAAATG TATCTGAATC 000720 000721 AGAATCGAAC ACCCACTTTA TGCATAGCTC CCTAATCAGG AAGTTATTCT TCCCATCAAA GCAACTGGAA AGAAAAAAGA 000800 000801 TAAAACAATG AAGGGAGGAG AAAACACAAA AGTTCAAGAA GAGCAGAATG TTCCGGTCTG TGGCGTTGAC ATTATCAATG 000880 000881 CTATGGATGC CTCAAGGCTC TCATAAAAAT ACATGGCTTC AGCAATACGC ATGCAGTTAT CTCAGTTTAA AGGAAATGGG 000960 000961 TTCTGCTCCC TGCTTAATAA GAAATCCTGC TTACTTCTCC AGCTTTTGAA GCACAGATTA TTTTTCTTCT CTTCATCATA 001040 001041 TAAAAATGGA AATTATCAAA ACAAAACATC ATCAAAACAA AACATCATCA AAAACAGGTT GCTCTCTGAG TAAAGGTTTT 001120 001121 ATGTTTGTTT GG |
Predicted Small Protein
Name | ENST00000437897.3_smProtein_380:490 |
Length | 37 |
Molecular weight | 4377.1836 |
Aromaticity | 0.194444444444 |
Instability index | 47.9361111111 |
Isoelectric point | 9.86260986328 |
Runs | 6 |
Runs residual | 0.0137917637918 |
Runs probability | 0.0367720661838 |
Amino acid sequence | MWKALRSISTKEQHYGHFVFVITYCFILRTIQALKF |
Secondary structure | LHHHHHHLLLLLLLLLLEEEEEEHHHHHHHHHHHHL |
PRMN | LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHL |
PiMo | iiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTo |