ENST00000438872.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000438872.1

Source

Gencode19

Same with

lnc-CCDC51-1:2,NONHSAT089568

Classification

antisense

Length

885 nt

Genomic location

chr3-:48481762..48488036

Exon number

2

Exons

48481762..48482272,48487663..48488036

Genome context

Sequence
000001 GGTCCACGGG CGGGATTCGG CAGGTTTGCT GCAAGGACTC AGTGCGGCGC GACCCGTTAC CGGAGAGGCG GGCCGGAGGC 000080
000081 GCACCAGCTC CGCCGCGCTG GTGGCTTTGC GCTCCCTCCC TGGCACTCCG TGGAGGAGGG CCGCGCAGGA GCAGCCTGCC 000160
000161 CTAGCATTCA CGCGTGTTGC GTTTGAGTCG AGCCAGGCAT CATTCAGGGA TGTGGTCTCC GTGACCTCGC TTTCCTTCTG 000240
000241 CCGCCAGACC CACCTCCCAC AAACCCCTAG GCTTTCTTGA GGAGAGTGGA ATTTGTTGGG TGAGGAGTAT GAATAGAGCT 000320
000321 GTCGTGTGCA GACATCTTCG GGTTTAGTGA ATGTTTCACA TGTGTACATT TGAGCTCTTC CTAAGGAATG GAAGCCCAGA 000400
000401 CTGCCTGGGA GGCAGGAGAC CTCGTTTCCA GCTCCCGGCC CTTACTGCCG CTGCAAATCC TAGACTGGCT AGAGACCATT 000480
000481 CGCTGCAGCG GACGTCGGAA AACGAGACCT CGCAGTTCAG GAGGCAGGAA AAAGACATGC CCGCGCCCTC ATCCCAATAG 000560
000561 GTGCTCATAG CGTTTGGCCA GCTTGAGCTC CATTCGGCCC CCACTTACCC AAGGGCCCCT TCCCCGCGGC CTTCGCTTTT 000640
000641 AGCTCCTCGA GTTTCTTCTG CTCCTCTTTT TGTTTCTGCT TGAAAGCCTT ATCTTCCTGG GGAGAGGCAG AGCGTGTTCA 000720
000721 ACTCAGGCCT GTCTCCCAGC GCCCCCGCAC CCGCCAGTGC CTCCGCGCCC GCCCTCACCT CGTCCATCTC CTTGGCCTGC 000800
000801 TTCTTGGGCT GTTTCAGTGG CTTCTTCTTG CCACCTGTGG GCGACACGAG CACGTTCGGC CTGCCCCTGC CGCCCGGTCC 000880
000881 CCACC
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Predicted Small Protein

Name ENST00000438872.1_smProtein_350:559
Length 70
Molecular weight 7905.8474
Aromaticity 0.0724637681159
Instability index 86.1202898551
Isoelectric point 9.66546630859
Runs 10
Runs residual 0.00559621179509
Runs probability 0.0444267797209
Amino acid sequence MFHMCTFELFLRNGSPDCLGGRRPRFQLPALTAAANPRLARDHSLQRTSENETSQFRRQE
KDMPAPSSQ
Secondary structure LEEEEEEEHHHLLLLLLLLLLLLLLLLLHHHLLLLLLHHHLLLLLLLLLLLLLHHHHHHH
HLLLLLLLL
PRMN -
PiMo -