ENST00000439960.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000439960.1 |
Source |
Gencode19 |
Same with |
lnc-DNAI1-1:1,NONHSAT130857 |
Classification |
antisense |
Length |
631 nt |
Genomic location |
chr9+:34521525..34524239 |
Exon number |
3 |
Exons |
34521525..34521741,34522255..34522394,34523966..34524239 |
Genome context |
|
Sequence |
000001 GACAGGGGCC AGGGCTGGAG TTGGGACTGG ATTCAGAGAG AGAGTCAACG TCGGCAGAGC GAGAATGGCA GGCCCAGCAG 000080
000081 AGGATGACCC AGAGCAGCAG CAGCAAGAAG CCCACGAGAC CGTTGCAGAC GATGGCGATG AGGGCCCCCT GGGAGATGGC 000160 000161 TGCCCCCATG ACAGGCAGCA CCCTCAGACC AGCACAGACA GTGGAGCTGC CTCAATGGAC TCCAGCCAGC CCGACCAGGA 000240 000241 GACCTCCAGA GGCGCCAGCT TGCACAGAGG GAACTTTGTG GAGGCCCTGG CAGGCATGTG CAGGCTCTGT GCGTCCAGGG 000320 000321 CTGTGTGCCT CTATGTGGGG CTGCCTCTCT GGGTCAGGCC AGTGATTGTC ACCTATTCTG ATCCGGCCGT CTTCTCATCC 000400 000401 CGCTCTACAT GCTCTCCTTG GAGGATCACA TCCCTGAAGC TATATCATGA AGACTCCCAG TGCTCCCAAG TCTAGCCTTA 000480 000481 ACTTCTCTCT GGAATCCTAG ACTCATATAA CTAAGTGCCT ACTGTAATCG GGGCAGTATT GATTCCTGGT TCACTTACTA 000560 000561 ACTTTGTGAT CTTGAGCAAG TTACTAAATC TCTCTTAGCC TCAGCTTCCT CATCTGTAAA ATGGTTGTAA T |
Predicted Small Protein
Name | ENST00000439960.1_smProtein_83:364 |
Length | 94 |
Molecular weight | 9986.4213 |
Aromaticity | 0.0537634408602 |
Instability index | 81.4107526882 |
Isoelectric point | 9.68524169922 |
Runs | 12 |
Runs residual | 0.00189167662286 |
Runs probability | 0.0434773008303 |
Amino acid sequence | MTQSSSSKKPTRPLQTMAMRAPWEMAAPMTGSTLRPAQTVELPQWTPASPTRRPPEAPAC TEGTLWRPWQACAGSVRPGLCASMWGCLSGSGQ |
Secondary structure | LLLLLLLLLLLLHHHHHHLLLLHHHLLLLLLLLLLLLEEEELLLLLLLLLLLLLLLLLLL LLLLLLLHHHHHLLLLLLLLHHHHEEEELLLLL |
PRMN | - |
PiMo | - |