ENST00000440816.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000440816.1 |
Source |
Gencode19 |
Same with |
lnc-CRYBA4-1:36,NONHSAT084542 |
Classification |
intergenic |
Length |
591 nt |
Genomic location |
chr22+:27068777..27172845 |
Exon number |
5 |
Exons |
27068777..27068950,27113216..27113422,27114103..27114194,27170119..27170180,27172790..27172845 |
Genome context |
|
Sequence |
000001 GTGGAGTATT TAGTACACAG GAAGTCGGCC AGAGAAACAT TTCTCATATT TGAAGGCCGG AAAGAGGGAC ATTTCTGACA 000080
000081 CCGGAAGTCA GTGAGAGGAC TCTTTCCCAC ACAGGAAGTC AGCTAGAGAG CCGTCTCCCC TCTCTGGAGC CGAGAGAGGC 000160 000161 CGGTTTCCCC CACCGTAGCC CACCTGGGAG GAATTTTCCA GAGATCACTG TCTGATGACC CTGTCTTGGA ATTGGAGCCA 000240 000241 TGCAAGTTAC ACTGACCACG TTTGGGTTGG GATATTGAGG AGGTTATGGT TAAAAGCATA CGATGGGAGA TCATATTGTA 000320 000321 CTTGCGAGTG AGACCCGGCT GGAGGAATGT TTTAATTCTT CGGAAATACC AAGTGGTCTC TAGATGGGTT TTCACTATTT 000400 000401 TTCCCAGGCT AGTCTCCAAC TTCTGGGCTC AAGCGATCCA CCCGCCTTGG CCTCCTAAGT CCTAGGATTA TAGGTCTCAC 000480 000481 ATGAGTACTT CACAATGGGG AAACTGAACT GGAACTCTAC TGACAACGCA GTTGGGAGTT CAAACTTAAT AACCTTCCAG 000560 000561 AGTTGGTATC AAATTCAGAC GCTGACGCTC C |
Predicted Small Protein
Name | ENST00000440816.1_smProtein_302:382 |
Length | 27 |
Molecular weight | 2835.1268 |
Aromaticity | 0.0384615384615 |
Instability index | 88.6192307692 |
Isoelectric point | 4.24542236328 |
Runs | 5 |
Runs residual | 0.0169946332737 |
Runs probability | 0.0421833598305 |
Amino acid sequence | MGDHIVLASETRLEECFNSSEIPSGL |
Secondary structure | LLLEEEELLLLLHHHHLLLLLLLLLL |
PRMN | - |
PiMo | - |