ENST00000441052.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000441052.1 |
Source |
Gencode19 |
Same with |
lnc-DBNL-1:2,NONHSAT120341 |
Classification |
intergenic |
Length |
2590 nt |
Genomic location |
chr7+:44079122..44081905 |
Exon number |
2 |
Exons |
44079122..44079298,44079493..44081905 |
Genome context |
|
Sequence |
000001 CTTCTCCTCG ATGTCCACGA GCTTGGTGAT GAAGTCCTTC AGCTGCGCCA CGCCCTGGCG CACGGTGGGC TGCAGCGGCT 000080
000081 CCATCCAAGC CTCCTTGGCC CTGGAAGCCG GCGTGTCCAT GTTGCCCACG TTCTGGACTG CCTGGAGGTG ACAGCAGGAA 000160 000161 GGACCAGGTT CTGCTAGGTT TAACTGACGC TGCTGCACTG GATACCCCAC CCCGGTGCCG GGCACATAGG TGCAGCCTGA 000240 000241 GAGTAAGCAG ACCTGGGTTG GAAGGTCCCG CGATTCACCA CCGACAGGAT GGGCGGCCTT GGCAACCCCC GACCCCTCGC 000320 000321 AGGCCTGTTC CCTTATCCAT GAGATGGAAC TCGGACAAGG TGGCCACAGG AAGGCTTTGC AAACTGTGAA GTGCAGTGCC 000400 000401 TACGTGGGCG TGCCAGTGGC CTCGCCGGAG CCGGTAGGGA ACACTCTGCA GTCCAGGCCA GGGCCCCGGT AGGACACCCA 000480 000481 GCTGTGCATC CCGCCCGTGG CCGCAAGGCC CGCACCTTGG CCAACAGGAG CAGGGTGCGG CTGGTGCGGG CGTCCGCGTG 000560 000561 GCGCTCCCGC AGGTGGAAGA GCTTGGGCGA CATGATGGCG GGAGAGAAGA AGCGCAGGCA CAGGAAGCTG GTGACGGCGA 000640 000641 TGAACGGTAC ATTCTGGAGG GGTGCGGAAG AGCGCGGGCT GGAGTCCCCC AGACCAGGGC TCCTGGCAGC CCCCTCCCCT 000720 000721 TAGGCTCCGT CCCTGACCCT CGCCGGGACA CAGCCTCCCT GGTCCTCCCC AGCGCTCCCT GGTTCCCCAC CGCTCTTCGC 000800 000801 CCGCCCCTCG CCCCAGCCCA GTCCAACCCG GCCCAGCCTA GCCCAGCGGG TGGAGGGCGC ACCTCGTGCT GGGCGCCGGG 000880 000881 GAAGCGCTCG CGCACGCGCC GGAAGAGCTG GCGGAAGGTG GCGCGCACCA CGGCGGGGCA CGCGGGAACC GAGCGGCTGA 000960 000961 GCGCGCTCAG CAGGGCCCCC AGGTGGGCGC GCAGCGTCTG CGCGCTCTGC TCCAGCACCT CGGCCTCGGT CTGCGGGCGG 001040 001041 TGCAGCCCGG AACACCTGCG TGGAACGGGG CGGGTTGGCA GAGGAGGTCA CGGTCAGCGC CAGGGCCACG ACAGGAACAG 001120 001121 TGGCTCTCAC AGCAGCCGGG ACACGGACAC AGGGGACAAT ACACGGGTGG GCAGAAGCAC AAACACACAT GCTGACAGGG 001200 001201 CCTGATCCCA ACCCGCTGCC GCTGCGCCCC GCACCCCCCC GGAGTTACCC CCGGCCTCAC CCTACATCCT TAACTTCCAC 001280 001281 TTTGCTGGGG TCCAGCTCCA CGTACTTCTC CTCAAACACC TTGTTGATGA TGGGGCCCAG GACGCCGTGC AGGTACTGCA 001360 001361 TCCCGGCCAC CTGGGGACCA CCGCAGGTCA CATTGATCCT GTCTCCCCCA GTCCCACTCC AGCTGCCCAC CTTCTCCCGG 001440 001441 CAGCCGCCCT TGCACCGTTT GCCTGCCGTA TCCGCCCAGG AGGGGGACAG GTACACAAGC AGGGCAAACT GTTTATTCAT 001520 001521 GAATGAATGA ATGAGTGAGT GAATGAATGA CTAGAATTCT TAGCCCTTGT AATCCTAGCA CTTTGGGAGG CCGAGGCAGG 001600 001601 AGGATCACTT GAGGCCAGGA GTTTGAGACC AGCCTGGGCA ACATAGTGAG ACTGTCTCTA ACTTAAATTT TAATCACACA 001680 001681 CACATTCTTT TGGGGGGGGG GGGTGCGGGG CACGGAGTCT AGCACGGGGC CCAGGCTAGA GTGCAGTGGC GTGAGCTCAC 001760 001761 TACAATCTCT GGCTTCTGGT TCAAGTGAGT CTCCTGCCTC AGCCTCCCCA GTAGCTGGGA TCACAGGTGC CCACCACCAT 001840 001841 GCCAGGCTAA TTTTTGTATT TTTAGTAGAG ATGGGGTTTC GCCATGTTGG CCAGGCTGGT CTCGAACTCC TGACCTTAAG 001920 001921 TGATCCGCCC GCCTCAGCCT CCCAAAGTGC TGGAATTACA GGCATGAGCC ACTATGCCCA GCCACATTCT TAACCTTAAA 002000 002001 GGGCTCTCAA TATGGAGATA GAACACTGGA GTCGAAGTCC CAGCCCCCTC TGTCGCTCTC TCTGAAGCTC AGTGTTGTCA 002080 002081 TTTGCAAGAT GAGGACAATA TAGCATGCAA CCTCACCTTC AGAAAAGACT CCATGGACTT TGAGGCCAGA GAGTTGCTCC 002160 002161 GGAACAGGGT GTTGGTCTTT TGTTACTTGG TCATAAGTAG GCGTTTTCCT TTTGATTTGG TTCTAGGAGG TTAGTGTGCA 002240 002241 TTGGCGTTCT GTTGCCTGCT TCCAGCCCCT ATTCTCCTGC CTCAGGTTCA TTAGAAAAGA CTGAGTTTGG GGCCGGGCAG 002320 002321 GGTGGCTCAC ACCTGTAATC CCAGTACTTT GGGAGGCCAA GGTGGGCAGA TCACGAGGTC AAGAGATCGA GACCATCCTG 002400 002401 GCCAACATGG TGAAACCCTA TCTCTACTAA AAATACAAAA ATTATCTGGG CATGGTGGCA CGTGCCTGTA GTCCCAGCTA 002480 002481 CTCAGGAGGC TGAGGCAGGA GAATTACTTG AACTTGGGAG GCAGAGGTTT CAGTGAGCCG AGTTCGTGGT CACTGCACTC 002560 002561 CAGCCTGGCT ACAGAGTGAG ATTCCATCTC |
Predicted Small Protein
Name | ENST00000441052.1_smProtein_2132:2233 |
Length | 34 |
Molecular weight | 3945.6567 |
Aromaticity | 0.151515151515 |
Instability index | 59.3333333333 |
Isoelectric point | 7.97637939453 |
Runs | 7 |
Runs residual | 0.0279973649539 |
Runs probability | 0.0223206399677 |
Amino acid sequence | MDFEARELLRNRVLVFCYLVISRRFPFDLVLGG |
Secondary structure | LLHHHHHHHHLLEEEEEEEEEEEEELLLLEELL |
PRMN | - |
PiMo | - |