ENST00000441052.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000441052.1

Source

Gencode19

Same with

lnc-DBNL-1:2,NONHSAT120341

Classification

intergenic

Length

2590 nt

Genomic location

chr7+:44079122..44081905

Exon number

2

Exons

44079122..44079298,44079493..44081905

Genome context

Sequence
000001 CTTCTCCTCG ATGTCCACGA GCTTGGTGAT GAAGTCCTTC AGCTGCGCCA CGCCCTGGCG CACGGTGGGC TGCAGCGGCT 000080
000081 CCATCCAAGC CTCCTTGGCC CTGGAAGCCG GCGTGTCCAT GTTGCCCACG TTCTGGACTG CCTGGAGGTG ACAGCAGGAA 000160
000161 GGACCAGGTT CTGCTAGGTT TAACTGACGC TGCTGCACTG GATACCCCAC CCCGGTGCCG GGCACATAGG TGCAGCCTGA 000240
000241 GAGTAAGCAG ACCTGGGTTG GAAGGTCCCG CGATTCACCA CCGACAGGAT GGGCGGCCTT GGCAACCCCC GACCCCTCGC 000320
000321 AGGCCTGTTC CCTTATCCAT GAGATGGAAC TCGGACAAGG TGGCCACAGG AAGGCTTTGC AAACTGTGAA GTGCAGTGCC 000400
000401 TACGTGGGCG TGCCAGTGGC CTCGCCGGAG CCGGTAGGGA ACACTCTGCA GTCCAGGCCA GGGCCCCGGT AGGACACCCA 000480
000481 GCTGTGCATC CCGCCCGTGG CCGCAAGGCC CGCACCTTGG CCAACAGGAG CAGGGTGCGG CTGGTGCGGG CGTCCGCGTG 000560
000561 GCGCTCCCGC AGGTGGAAGA GCTTGGGCGA CATGATGGCG GGAGAGAAGA AGCGCAGGCA CAGGAAGCTG GTGACGGCGA 000640
000641 TGAACGGTAC ATTCTGGAGG GGTGCGGAAG AGCGCGGGCT GGAGTCCCCC AGACCAGGGC TCCTGGCAGC CCCCTCCCCT 000720
000721 TAGGCTCCGT CCCTGACCCT CGCCGGGACA CAGCCTCCCT GGTCCTCCCC AGCGCTCCCT GGTTCCCCAC CGCTCTTCGC 000800
000801 CCGCCCCTCG CCCCAGCCCA GTCCAACCCG GCCCAGCCTA GCCCAGCGGG TGGAGGGCGC ACCTCGTGCT GGGCGCCGGG 000880
000881 GAAGCGCTCG CGCACGCGCC GGAAGAGCTG GCGGAAGGTG GCGCGCACCA CGGCGGGGCA CGCGGGAACC GAGCGGCTGA 000960
000961 GCGCGCTCAG CAGGGCCCCC AGGTGGGCGC GCAGCGTCTG CGCGCTCTGC TCCAGCACCT CGGCCTCGGT CTGCGGGCGG 001040
001041 TGCAGCCCGG AACACCTGCG TGGAACGGGG CGGGTTGGCA GAGGAGGTCA CGGTCAGCGC CAGGGCCACG ACAGGAACAG 001120
001121 TGGCTCTCAC AGCAGCCGGG ACACGGACAC AGGGGACAAT ACACGGGTGG GCAGAAGCAC AAACACACAT GCTGACAGGG 001200
001201 CCTGATCCCA ACCCGCTGCC GCTGCGCCCC GCACCCCCCC GGAGTTACCC CCGGCCTCAC CCTACATCCT TAACTTCCAC 001280
001281 TTTGCTGGGG TCCAGCTCCA CGTACTTCTC CTCAAACACC TTGTTGATGA TGGGGCCCAG GACGCCGTGC AGGTACTGCA 001360
001361 TCCCGGCCAC CTGGGGACCA CCGCAGGTCA CATTGATCCT GTCTCCCCCA GTCCCACTCC AGCTGCCCAC CTTCTCCCGG 001440
001441 CAGCCGCCCT TGCACCGTTT GCCTGCCGTA TCCGCCCAGG AGGGGGACAG GTACACAAGC AGGGCAAACT GTTTATTCAT 001520
001521 GAATGAATGA ATGAGTGAGT GAATGAATGA CTAGAATTCT TAGCCCTTGT AATCCTAGCA CTTTGGGAGG CCGAGGCAGG 001600
001601 AGGATCACTT GAGGCCAGGA GTTTGAGACC AGCCTGGGCA ACATAGTGAG ACTGTCTCTA ACTTAAATTT TAATCACACA 001680
001681 CACATTCTTT TGGGGGGGGG GGGTGCGGGG CACGGAGTCT AGCACGGGGC CCAGGCTAGA GTGCAGTGGC GTGAGCTCAC 001760
001761 TACAATCTCT GGCTTCTGGT TCAAGTGAGT CTCCTGCCTC AGCCTCCCCA GTAGCTGGGA TCACAGGTGC CCACCACCAT 001840
001841 GCCAGGCTAA TTTTTGTATT TTTAGTAGAG ATGGGGTTTC GCCATGTTGG CCAGGCTGGT CTCGAACTCC TGACCTTAAG 001920
001921 TGATCCGCCC GCCTCAGCCT CCCAAAGTGC TGGAATTACA GGCATGAGCC ACTATGCCCA GCCACATTCT TAACCTTAAA 002000
002001 GGGCTCTCAA TATGGAGATA GAACACTGGA GTCGAAGTCC CAGCCCCCTC TGTCGCTCTC TCTGAAGCTC AGTGTTGTCA 002080
002081 TTTGCAAGAT GAGGACAATA TAGCATGCAA CCTCACCTTC AGAAAAGACT CCATGGACTT TGAGGCCAGA GAGTTGCTCC 002160
002161 GGAACAGGGT GTTGGTCTTT TGTTACTTGG TCATAAGTAG GCGTTTTCCT TTTGATTTGG TTCTAGGAGG TTAGTGTGCA 002240
002241 TTGGCGTTCT GTTGCCTGCT TCCAGCCCCT ATTCTCCTGC CTCAGGTTCA TTAGAAAAGA CTGAGTTTGG GGCCGGGCAG 002320
002321 GGTGGCTCAC ACCTGTAATC CCAGTACTTT GGGAGGCCAA GGTGGGCAGA TCACGAGGTC AAGAGATCGA GACCATCCTG 002400
002401 GCCAACATGG TGAAACCCTA TCTCTACTAA AAATACAAAA ATTATCTGGG CATGGTGGCA CGTGCCTGTA GTCCCAGCTA 002480
002481 CTCAGGAGGC TGAGGCAGGA GAATTACTTG AACTTGGGAG GCAGAGGTTT CAGTGAGCCG AGTTCGTGGT CACTGCACTC 002560
002561 CAGCCTGGCT ACAGAGTGAG ATTCCATCTC
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Predicted Small Protein

Name ENST00000441052.1_smProtein_2132:2233
Length 34
Molecular weight 3945.6567
Aromaticity 0.151515151515
Instability index 59.3333333333
Isoelectric point 7.97637939453
Runs 7
Runs residual 0.0279973649539
Runs probability 0.0223206399677
Amino acid sequence MDFEARELLRNRVLVFCYLVISRRFPFDLVLGG
Secondary structure LLHHHHHHHHLLEEEEEEEEEEEEELLLLEELL
PRMN -
PiMo -