ENST00000441399.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000441399.2 |
Source |
Gencode19 |
Same with |
, |
Classification |
overlapping(AS),antisense |
Length |
3473 nt |
Genomic location |
chrX+:131352535..131566890 |
Exon number |
3 |
Exons |
131352535..131352865,131373648..131373739,131563841..131566890 |
Genome context |
|
Sequence |
000001 GCCAAACATC CCTGGACTAG AAGTTGCAGG GGAAATCAAA CAGCCCAGAA AGTTTATTCT CCTTGCTGGT ATTTCTTCCA 000080
000081 CTTGCTATTT TGCTGAGAGA TGCATGCAAA CTACCCTTAG ACTTTCAGAT GCAGTGCGTT TTACTTAGCC GTGCCTGACA 000160 000161 AACACACAGA ACTTTTACCG TCTGGTAGAT CCGCCTTGAC TTTACCAGCG AATACTAAAG TCACTTAAAA AAAAATCACA 000240 000241 AGGCTCGAAA ACAGCAGCAT TAGAAGTAGA CTTTATGGTA CTCTGCTCAG CTATGTTCTC ATTTGATTCC AACCACTACA 000320 000321 CGGCAGAAAA GACTGATGAG CTTCTCTGTG CAAGGGTGCC TTTTTGGAGC AATGTCCCCA TTCGGTCCAT TGATATGAAC 000400 000401 CACTTCATTG AATGTCTTAG ACGGAAAGAA GACTGAATAA TGATTGGAAG AACGCCGGAG TCATCAAGCT CTTTTGATAA 000480 000481 CTGCATATGT GAACTAGGTC AAGTCACTCT CCCTCAACGG ATCACCAGTT TACCCAACTG TAAATGGCAA CAATTTTGAA 000560 000561 CTGAACGTTC TTCCTTCTAC AGCCAAAATT CTTCGTTTGC TAGGTTTGTG AAGTGCTTTT ATATGTATGA GCGCTTTCTT 000640 000641 AACTATGAAG ATATCTGAGT CATCGAACTT TTGGTGGGGG CAATCTCATG ATCAGTCATG ACTAGATTTT AGAGTTTTCT 000720 000721 CATCCCCATA CTCAAAGTTT TTTTTTTAAG AATAAAAATG AAAAGAAACA ATACCCCACA ATATTTCTGA GCCTCAAAGG 000800 000801 ACAGACTAAA AAAGCTAACT TTTAAAATAC TTCATTTTGA AATAATTTTG AACTTACAAA AAAATCGCAA AAATAATACC 000880 000881 TGGAGTCCCT GTATACCCTT CACCCAGATT CCCCTACTGT TAAATACTTA CATAACCATA ACACAATTAC CAAAACCAGG 000960 000961 AAATTAACAC TGGTACGAGA CTCTTAACAA GAGATCTTAT TTGAATGTCA CCAATTTTCT TCCTAATGTT CTTCTGTTCT 001040 001041 AGGATCCAAT CCAGGTTCCC ACATGGCATT TATTCCTCAC TTCTCCTTAG TCTCCTCCAA TCTGTGACAC TTTCTAAGTC 001120 001121 TTTCCTTGTC TTTCATGACC ATGACACTTT GGATGAGTAC TGGTCATTTA TTCTGTAAAA TGCCTCTCAC TTTGTGTTTG 001200 001201 TTGAATGTTT TCTCATGATT AGACCGAGAC CATGTCTTTT TGGCAGGAAC ATCACAGAAA TGGTGTGTAT CCTATCTGAG 001280 001281 GGTATGTGAT ATTGATATAT CTTATCACTC ATTATGTTAA CCTTAAACAC CTGGTTAAAG TGGCATCTGC TGGGTTTCTC 001360 001361 CACTGTAAAG TGACTATTTT CCCTTTATTT ATTTATTTTA GAAACAGGGT CTTGCTGTGT TGCCCAGGCT GGAGTGCAGT 001440 001441 GGCACAATCA CTGCTCACTG CAGCCTCAAT CTCCCAGGCT CAAGCGATCC TCTGCCTCCT GAGTAGCTGG GACTACAGGC 001520 001521 ATGCACCATT ATGCCCAGTT AATTTTTTTA AAAATGTTTT GTATAGACAG GGTCTCGCTA TATTGCCCAG GCTGGTCTCA 001600 001601 AACTCCTGGC CTCAAAAGAT CCTCCCACCT CGGCCTCCCA AAGTGCTGGG ATTAAAGGCA TGAGCCAGCC ACCATGCCTG 001680 001681 GTCTATTTTT TATTGATAAA TGAAATAGAC CATGCCTGTT CTATTTTTAA TTGATAAATA TCCTGGGAGA AATACTTTGG 001760 001761 GACAATGCAA ATATCCTGTT TCTCCTCCAA CTTTTACCCA CTGATTTCAG CATATATCAG TGGATCTTGC CTGCAACCAT 001840 001841 TATTACCATG GCATTTGCCT ACTAGTGATT TTGTGTTTCC TTCATTTGTT CTCCATTTAT TAATTGGAAT TCTTCTGTAA 001920 001921 GGAGGAGTTG TCCCTTCTCC CCAACTTATC CATTTATTCA ATTTTTTTTG TAAACTATGG ACTCATGGGC ATCTATTTTA 002000 002001 TTCTATGAGC TATAATTCAA TACTGTCATC ATTTAGTTTC TTGCTCAAGT TATTCTAACT TCAGCCATTG GGAGCTCCTT 002080 002081 CAGACTGGCT ACTATGCTGT CTTGTCATGC CCCCACCCTT TCTCTAGCAC TTTCTTACAT TCTTACACCA AAAGACATTA 002160 002161 CAGCCTCATC TTGTATTTTC CCTGCTTCTG TCCAGAATTA GCCATTATTC CAAAGATCCC GAGTTCCTTT ATTGGAGAAT 002240 002241 GATATTAGAC ACAAAGATGT GGGTACTAAG TATACTCGTT GCTGTTGGGG TGTTAATTGC TTCTAGGGCT TCCCAAGACA 002320 002321 GAGCTAGGAA ATGAAAGCAT ACATAATAAC CCATGCATAC ACACAGATCA ATATCTATTC CTGTATCTAT CTGTATACAT 002400 002401 ACTCATGTGT CCTTTCTAAT CCACACCACG GTATTCATCC TAACCTTCCC TTTTTATTTT TAACTTTTTT CCTCTGATAG 002480 002481 TGAGAAAATA GGCTCTCATT ATCTACTCTA TATACATTTA TTTGTTCAAC CTCAGTATCT ACATACTTAC ATATGCCTGT 002560 002561 GAGGAACAGA TTTACTAACT AGAATCCTGT ATTTGTGTGC AATTCTTTTT ATCTTTATTA TAAATATAGC ACCTCCAGGC 002640 002641 TTCTTTTTAT TAGTGTCAGC ATGACATAGC TTTTCCCATC TTTTTACTGT TAATATTTTA AACTCAAAAA AAGCAAGGAG 002720 002721 GAAAACAGTA TGCTACTATC TGTGTGAAAA TGGAAAATAA GTATGGATAT ATTTGCTCAT ATGTATATAT ATAATATCTA 002800 002801 TGGGAGAGGG AAAACCAAAA TATCAGTTTG GAGGTCAACT GATTAACTGG GGAAAAGAGA TGAGGGGAAA ACTTCGCTGC 002880 002881 ATACTCTACT ATCGTTGAAA TTTCTTAAAC TTTTTCATTG AGTATAATTC ACAAATCATA AAACTCACCC TTTTAAAGTC 002960 002961 TACACATCAG TAGTTTTTAA CACATTTATA TACAAAGTTG TGTAACTATC ATCACTAATT CCAGGACATT TTCATCACCC 003040 003041 TTAAAAAAAA AGCCATGTAC CCATTAGTAG TTAATTCCCA TACCCCTCAC CCCTCACTCA CCCATCTACT GCCCTTCACA 003120 003121 AGACCCTGGC AACCACTAAT CTGCTTTCTG TCTCTATGGA TTTGCCAACT CTTGATGTTT CATATAAATG GAATCACACA 003200 003201 ATATGTGACC TTTTATGTCT GGCTTCTTTC ACTTAACATC ATGTTTTTAA GGTTCATCCA TGTTGTAGCA TGGATCAGTA 003280 003281 CTTTGTTCCT TTTTGTAGCT GAGTAATATT ACATTGTATG TATATACCAT ATTTTGTTGA TGTACTCATT AGTTGACTGT 003360 003361 TTTTCTAAAT TTTTGAATTA TGAAAATATC CATTCAAAAA TTAAACTTTA AAAAATAGAA ACAAAATGAA AAAGCCCTTC 003440 003441 TCATAAAAAA CAGAAAAATG TAAAAAAAAA AAA |
Predicted Small Protein
Name | ENST00000441399.2_smProtein_1004:1177 |
Length | 58 |
Molecular weight | 6762.824 |
Aromaticity | 0.19298245614 |
Instability index | 54.0192982456 |
Isoelectric point | 6.21502685547 |
Runs | 10 |
Runs residual | 0.0214912280702 |
Runs probability | 0.0732909379969 |
Amino acid sequence | MSPIFFLMFFCSRIQSRFPHGIYSSLLLSLLQSVTLSKSFLVFHDHDTLDEYWSFIL |
Secondary structure | LLLLLEEEHHHHHHHLLLLLLHHHHHHHHHHHHHLLLLLEEEEELLLLHHHHHHHHL |
PRMN | LLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooooooooooooooo |