ENST00000441882.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000441882.1 |
Source |
Gencode19 |
Same with |
lnc-VGF-1:1,NONHSAT122435 |
Classification |
antisense |
Length |
407 nt |
Genomic location |
chr7-:100657601..100660889 |
Exon number |
3 |
Exons |
100657601..100657720,100658479..100658571,100660696..100660889 |
Genome context |
|
Sequence |
000001 TCAAGGCCGA ATCTGCTCTC CCTCAGATTC TGGTCTGTAG GGAGAGGCCG TGATGAGTGA TGGGAGCCTT GGTAGGGGGA 000080
000081 GGACTAGGGG GCAGAGGGGA TTTCCTCTGG CAAAAGGAAG AGTCAGCCCG GCATCTGCCC TACGCCCTTT CCCACTGCCG 000160 000161 ACCACCCCTC CGACCCTGCA TCACTGGGCT GCGGGTGCAT CTTATCCCAT TTTACAGCTG GGAAAAGTGA GACCCAGACG 000240 000241 CTCCATCTCA GCTTCCCCAT GTGGTGCTGT GCTCTGTGGT GGCCAAGACT GCCATGTTGC CATGCTGTGA TGCAGCAAGA 000320 000321 AAGTCCTCAC CAGATGCAGC CCCTTGATCT TGGACTTCCC AGCCTCCAGA ACTGTGAGCC AAATAAACTT CTATTGTTTA 000400 000401 TCAATTA |
Predicted Small Protein
Name | ENST00000441882.1_smProtein_59:229 |
Length | 57 |
Molecular weight | 6275.2544 |
Aromaticity | 0.107142857143 |
Instability index | 58.2144642857 |
Isoelectric point | 9.29949951172 |
Runs | 11 |
Runs residual | 0.0431303669009 |
Runs probability | 0.0468918115977 |
Amino acid sequence | MGALVGGGLGGRGDFLWQKEESARHLPYALSHCRPPLRPCITGLRVHLIPFYSWEK |
Secondary structure | LLLEELLLLLLLLLHHHHLHHHHLLLHHHHHLLLLLLLLLLLLLEEEEEEEEEEEL |
PRMN | - |
PiMo | - |