ENST00000442456.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000442456.1

Source

Gencode19

Same with

lnc-AC007405.2.1-1:1,NONHSAT075417

Classification

intergenic

Length

2026 nt

Genomic location

chr2-:171579719..171627276

Exon number

7

Exons

171579719..171580103,171583795..171583838,171584169..171584298,171586878..171587507,171590389..171590504,171597142..171597797,171627212..171627276

Genome context

Sequence
000001 ACACCCTCGG ATTGACGTGC GCACGCGCAC CGGTTACCTT CAGGAGCGCC GAAGAAGGAA AGAAGAACAC AGAGCCCGAG 000080
000081 GCAAAGCTTA AGTGCTTACG CTTTTGTCGG GAGGTACAGA CCCAGCTCTG CGAGAGCCAG GGGAAAAGGA AGAGAGGCAG 000160
000161 GGAAGGAATG GCAGCAAGTA CAAGGTGATG AATGACTGCA CTGGCCATTG CTTCATGAAG AGCCACGAAA AAACAGAGCC 000240
000241 GGTTTCTCAG CAGGTGGCTG GCTGCTCAGT CACAAAGGAC CTCTTTGGAC AGGCTTTATG GAAATACTGT GCCTAGGACA 000320
000321 GTCGCTCAAA GGCAGGAGGG AGAGAAAATG CATCTGCAAG CTCACTTTGT CTTCTTTCTT CTGCTGGTCA AAATTTGCTG 000400
000401 GCTGGGGCAG TTAACGCCCT CACACATCCG AGTTGTGTCA CCTGGCCCCT TTGGTAGCCA CTGGGGAAGC CAGATCTAGG 000480
000481 CATGTGGCCT GATGGCTCCT GCGGTGGAAC CACATGCTCA CACTCAGTCA GTCACCACTG GGATGCCCTG GGCAGGGCAG 000560
000561 GCTGAGTGGC TGGGAGATAG CTGAGCCTAA GATATCTAAG CAAGCACCTG TGATGTATGC ACTGCAGTGT CCAAATGTGA 000640
000641 AAAAGCAAGA AAGGGAGATA GAAGCATATT TTTTTCTGGA GAGAAGGAGG AAACCACCAG GAGAATACAA ACAGAAAAAA 000720
000721 GACATGCTCA TCATGCCCTG CAAACTCCTA TGAACTGGAA CTACAGCAGC TGTTCTGCCA GGGACAGGTT CTTCTCTAAA 000800
000801 GTTCCAGCTC TCTGGAGGGA GAAAGCCCTG ACTTTGGATG GAGTTGAGCT CTGTCGCCCA GGCTGGAGTG CAGTGGCACC 000880
000881 ATCTCAGCTG ACTGTGACCT CCGCCTCCTG GGTTCAAGTG ATTCTCCTGC ATCAGCCTCC CGAGTAGCTG GGACTACAGG 000960
000961 TGCACACCAC CATGCCCGGC TAATTTTTGT ATTTTTAGTA GAGACGGGGT TTTGCCATGA TGGCCAGGTT TGGTCTCAAA 001040
001041 CTCCTAACCT CAAGTGATCC ACCCTCCTCA GCCTCCCAAA GTGCTGGGAT TACAGGCGTG AGCCACTGCG CCCCGCCTAC 001120
001121 TTGAATTTTT TTTTTTTTTT TTTTTTTTGA GACAGAGTTT TGCTCCTGTT GCCCAGGCTG GAGTGCAACG GCATGATCTC 001200
001201 GACTCACTGC AACCTCTGCC TCCTGGGTTC AAGTGATTCT CCTGCCTCAG CCTCCCAAAT AGCTGGGATT ACAGGTGCCC 001280
001281 ACCACTGTGC CTGGCTGATT GTATTTTTAG TAGAGATGGG GTTTCATCAT GTTGGTCAGG CTGGTCTTGA ACTCCAGACC 001360
001361 TCAGGTGATC GGACTGCCTC GGCCTCCCAA AGTGCTGGGA TTACAGGCAT GACCCACTGT GCCCGGACCT GCTTGAATTT 001440
001441 TTATGATGAG CATGTTGGCA GATCACGACT GCCAGCTCCG TGACAGCAAG AACCTTGTAT GACTTTTTCA TGATGGATGT 001520
001521 TCATCTGTGC CATCTGTAAA TATTGAATAA ATATTTGTGG AATACATGAA TCTAAAAGTG AATGGAATGA TAAAGAGGGA 001600
001601 AAGGGTCATG ACATCTACTA CAGCATTTGG CACAGACCCA GCTGTCTGCA GTACTATCAA GAGATGACAT GGACTTCAAG 001680
001681 GATCAAACAG GGGAGAAAAA GGCTTAAAAG AAAAACAAGT CTCCATCAAA GGTAATAACC ACAATGAGAA CTATACATAG 001760
001761 CTATGTGCTT ATAGGTCTTA GTTCACATTC CCCTCATTAA AATTATAGCT CAAGAAATAA AGGGCTGTTT AATGACTTGG 001840
001841 GTATATAAAT ATACTTCATT TGTATATTTT TTACTTGCTA AAATCTATCC AAATTGGTAT TACCTCAAAC CATAATCTTC 001920
001921 TACTGTATTT TATAATTTTA CTTTATTGCC ATGTATTTTT CCCACTGATG TTCACAAATT CACAGGAAAC ATCAGCCATG 002000
002001 TACTAAATAA AATATGAATT GAATCG
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Predicted Small Protein

Name ENST00000442456.1_smProtein_749:946
Length 66
Molecular weight 7332.3167
Aromaticity 0.107692307692
Instability index 46.7723076923
Isoelectric point 7.82696533203
Runs 13
Runs residual 0.0497115384615
Runs probability 0.0472667237374
Amino acid sequence MNWNYSSCSARDRFFSKVPALWREKALTLDGVELCRPGWSAVAPSQLTVTSASWVQVILL
HQPPE
Secondary structure LLLLLLLLLLHHHHHLLLLHHHHHHHHLLLLEEELLLLLEEELLLLEEEELLLLLEEEEE
ELLLL
PRMN -
PiMo -