ENST00000443939.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000443939.1 |
Source |
Gencode19 |
Same with |
lnc-TTLL7-8:1,NONHSAT004130 |
Classification |
intergenic |
Length |
643 nt |
Genomic location |
chr1-:81979565..82023387 |
Exon number |
4 |
Exons |
81979565..81979730,81980315..81980391,81980520..81980880,82023349..82023387 |
Genome context |
|
Sequence |
000001 TAATTGGAGT TATCCTGCGA TGCATGCTTA ACTTCTCCGT ATTCTCTTGT CTTTGTGGTG ATGTGGAGGG ACCCACTGAC 000080
000081 CAGAAGATAC ATCATTGCCT GAACACTGGC AGGAAAGGAA GAGCTGCCAA GTACCAACCA GAATCTAAAC GGAGATTGTT 000160 000161 GAAGGATGGA AGAAGAAATT AGATATAGGC TGTCAGTGCA CATATTTTTT GCATTAAATT ATAAACAATA TGCTGTTAAT 000240 000241 ATTTAAATCA CGGAGGAATA CCAGAAGAGA AAATATGTGT CCTTGTTTTT CTATCATTTC ACTTTCTCCT CACCATGTCA 000320 000321 ATATCAAAAG TATACTGTGT CTTTGTACTC CATGTCATCA GGCATATGCC TATCTGCAAG TACACAACAC TGCAGAGATG 000400 000401 TTAAAGGCAA ATAAGAAGCA TTCAGAAAAC TTCATGAACA TCAAATGTCA ATTGCAACAC AAGATTTTGA TACAACTCTT 000480 000481 GATTTGACTG GATTACTTCC CAACCCTCAG TAATGCTCCA TTGTGGGAGC CTGTGTCTCA ACAGTTCACA CCTGCCGTTT 000560 000561 ACTCCACTGG GTTGTGAAGA TTCACAGAAG ATGACAGGAA GGGGGGATAA ATAAGCTAAA ATAAACTTTA GAGGATGGCC 000640 000641 CCA |
Predicted Small Protein
Name | ENST00000443939.1_smProtein_23:181 |
Length | 53 |
Molecular weight | 5932.7615 |
Aromaticity | 0.0576923076923 |
Instability index | 56.2269230769 |
Isoelectric point | 9.81280517578 |
Runs | 9 |
Runs residual | 0.0227075184702 |
Runs probability | 0.0409036487468 |
Amino acid sequence | MLNFSVFSCLCGDVEGPTDQKIHHCLNTGRKGRAAKYQPESKRRLLKDGRRN |
Secondary structure | LLLEEEEEELLLLLLLLLLLLEEEELLLLLLLLEEELLLHHHHHHHHLLLLL |
PRMN | - |
PiMo | - |